feat: Phase 4 V1 — Robustness Hardening

Adds the observability + safety layer that turns AtoCore from
"works until something silently breaks" into "every mutation is
traceable, drift is detected, failures raise alerts."

1. Audit log (memory_audit table):
   - New table with id, memory_id, action, actor, before/after JSON,
     note, timestamp; 3 indexes for memory_id/timestamp/action
   - _audit_memory() helper called from every mutation:
     create_memory, update_memory, promote_memory,
     reject_candidate_memory, invalidate_memory, supersede_memory,
     reinforce_memory, auto_promote_reinforced, expire_stale_candidates
   - Action verb auto-selected: promoted/rejected/invalidated/
     superseded/updated based on state transition
   - "actor" threaded through: api-http, human-triage, phase10-auto-
     promote, candidate-expiry, reinforcement, etc.
   - Fail-open: audit write failure logs but never breaks the mutation
   - GET /memory/{id}/audit: full history for one memory
   - GET /admin/audit/recent: last 50 mutations across the system

2. Alerts framework (src/atocore/observability/alerts.py):
   - emit_alert(severity, title, message, context) fans out to:
     - structlog logger (always)
     - ~/atocore-logs/alerts.log append (configurable via
       ATOCORE_ALERT_LOG)
     - project_state atocore/alert/last_{severity} (dashboard surface)
     - ATOCORE_ALERT_WEBHOOK POST if set (auto-detects Discord webhook
       format for nice embeds; generic JSON otherwise)
   - Every sink fail-open — one failure doesn't prevent the others
   - Pipeline alert step in nightly cron: harness < 85% → warning;
     candidate queue > 200 → warning

3. Integrity checks (scripts/integrity_check.py):
   - Nightly scan for drift:
     - Memories → missing source_chunk_id references
     - Duplicate active memories (same type+content+project)
     - project_state → missing projects
     - Orphaned source_chunks (no parent document)
   - Results persisted to atocore/status/integrity_check_result
   - Any finding emits a warning alert
   - Added as Step G in deploy/dalidou/batch-extract.sh nightly cron

4. Dashboard surfaces it all:
   - integrity (findings + details)
   - alerts (last info/warning/critical per severity)
   - recent_audit (last 10 mutations with actor + action + preview)

Tests: 308 → 317 (9 new):
  - test_audit_create_logs_entry
  - test_audit_promote_logs_entry
  - test_audit_reject_logs_entry
  - test_audit_update_captures_before_after
  - test_audit_reinforce_logs_entry
  - test_recent_audit_returns_cross_memory_entries
  - test_emit_alert_writes_log_file
  - test_emit_alert_invalid_severity_falls_back_to_info
  - test_emit_alert_fails_open_on_log_write_error

Deferred: formal migration framework with rollback (current additive
pattern is fine for V1); memory detail wiki page with audit view
(quick follow-up).

To enable Discord alerts: set ATOCORE_ALERT_WEBHOOK to a Discord
webhook URL in Dalidou's environment. Default = log-only.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

deploy/dalidou/batch-extract.sh

@@ -150,4 +150,65 @@ print(f'Pipeline summary persisted: {json.dumps(summary)}')
     log "WARN: pipeline summary persistence failed (non-blocking)"
 }
 
+# Step G: Integrity check (Phase 4 V1)
+log "Step G: integrity check"
+python3 "$APP_DIR/scripts/integrity_check.py" \
+    --base-url "$ATOCORE_URL" \
+    2>&1 || {
+    log "WARN: integrity check failed (non-blocking)"
+}
+
+# Step H: Pipeline-level alerts — detect conditions that warrant attention
+log "Step H: pipeline alerts"
+python3 -c "
+import json, os, sys, urllib.request
+sys.path.insert(0, '$APP_DIR/src')
+from atocore.observability.alerts import emit_alert
+
+base = '$ATOCORE_URL'
+
+def get_state(project='atocore'):
+    try:
+        req = urllib.request.Request(f'{base}/project/state/{project}')
+        resp = urllib.request.urlopen(req, timeout=10)
+        return json.loads(resp.read()).get('entries', [])
+    except Exception:
+        return []
+
+def get_dashboard():
+    try:
+        req = urllib.request.Request(f'{base}/admin/dashboard')
+        resp = urllib.request.urlopen(req, timeout=10)
+        return json.loads(resp.read())
+    except Exception:
+        return {}
+
+state = {(e['category'], e['key']): e['value'] for e in get_state()}
+dash = get_dashboard()
+
+# Harness regression check
+harness_raw = state.get(('status', 'retrieval_harness_result'))
+if harness_raw:
+    try:
+        h = json.loads(harness_raw)
+        passed, total = h.get('passed', 0), h.get('total', 0)
+        if total > 0:
+            rate = passed / total
+            if rate < 0.85:
+                emit_alert('warning', 'Retrieval harness below 85%',
+                           f'Only {passed}/{total} fixtures passing ({rate:.0%}). Failures: {h.get(\"failures\", [])[:5]}',
+                           context={'pass_rate': rate})
+    except Exception:
+        pass
+
+# Candidate queue pileup
+candidates = dash.get('memories', {}).get('candidates', 0)
+if candidates > 200:
+    emit_alert('warning', 'Candidate queue not draining',
+               f'{candidates} candidates pending. Auto-triage may be stuck or rate-limited.',
+               context={'candidates': candidates})
+
+print('pipeline alerts check complete')
+" 2>&1 || true
+
 log "=== AtoCore batch extraction + triage complete ==="

scripts/integrity_check.py

@@ -0,0 +1,137 @@
+#!/usr/bin/env python3
+"""Nightly integrity check for AtoCore (Phase 4 Robustness V1).
+
+Scans the database for drift conditions that indicate something is
+silently broken:
+  - Memories referencing a non-existent source chunk
+  - Active memories with duplicate content within the same project+type
+  - Project-state entries with invalid project_id
+  - Orphaned source chunks whose parent document was deleted
+  - Memory count vs vector count parity drift (Chroma vs SQLite)
+
+Findings are written to project state
+(atocore/status/integrity_check_result) and surfaced on the dashboard.
+Any non-empty finding emits a warning alert via the alerts framework.
+
+Usage:
+  python3 scripts/integrity_check.py [--base-url URL] [--dry-run]
+"""
+
+from __future__ import annotations
+
+import argparse
+import json
+import os
+import sys
+
+# Make src/ importable when run from repo root
+sys.path.insert(0, os.path.join(os.path.dirname(__file__), "..", "src"))
+
+
+def main() -> None:
+    parser = argparse.ArgumentParser()
+    parser.add_argument("--base-url", default=os.environ.get("ATOCORE_BASE_URL", "http://127.0.0.1:8100"))
+    parser.add_argument("--dry-run", action="store_true", help="Report without writing findings to state")
+    args = parser.parse_args()
+
+    from atocore.models.database import get_connection
+    from atocore.observability.alerts import emit_alert
+
+    findings: dict = {
+        "orphan_chunk_refs": 0,
+        "duplicate_active": 0,
+        "orphan_project_state": 0,
+        "orphan_chunks": 0,
+        "memory_count": 0,
+        "active_memory_count": 0,
+    }
+    details: list[str] = []
+
+    with get_connection() as conn:
+        # 1) Memories referencing a non-existent source_chunk_id
+        row = conn.execute(
+            "SELECT COUNT(*) FROM memories m "
+            "WHERE m.source_chunk_id IS NOT NULL "
+            "AND m.source_chunk_id != '' "
+            "AND NOT EXISTS (SELECT 1 FROM source_chunks c WHERE c.id = m.source_chunk_id)"
+        ).fetchone()
+        findings["orphan_chunk_refs"] = int(row[0] or 0)
+        if findings["orphan_chunk_refs"]:
+            details.append(f"{findings['orphan_chunk_refs']} memory(ies) reference a missing source_chunk_id")
+
+        # 2) Duplicate active memories (same content + project + type)
+        dup_rows = conn.execute(
+            "SELECT memory_type, project, content, COUNT(*) AS n "
+            "FROM memories WHERE status = 'active' "
+            "GROUP BY memory_type, project, content HAVING n > 1"
+        ).fetchall()
+        findings["duplicate_active"] = sum(int(r[3]) - 1 for r in dup_rows)
+        if findings["duplicate_active"]:
+            details.append(f"{findings['duplicate_active']} duplicate active memory row(s) across {len(dup_rows)} group(s)")
+
+        # 3) Project-state entries with invalid project_id
+        row = conn.execute(
+            "SELECT COUNT(*) FROM project_state ps "
+            "WHERE NOT EXISTS (SELECT 1 FROM projects p WHERE p.id = ps.project_id)"
+        ).fetchone()
+        findings["orphan_project_state"] = int(row[0] or 0)
+        if findings["orphan_project_state"]:
+            details.append(f"{findings['orphan_project_state']} project_state row(s) reference a missing project")
+
+        # 4) Orphaned source chunks
+        row = conn.execute(
+            "SELECT COUNT(*) FROM source_chunks c "
+            "WHERE NOT EXISTS (SELECT 1 FROM source_documents d WHERE d.id = c.document_id)"
+        ).fetchone()
+        findings["orphan_chunks"] = int(row[0] or 0)
+        if findings["orphan_chunks"]:
+            details.append(f"{findings['orphan_chunks']} source chunk(s) have no parent document")
+
+        # 5) Memory counts (context for dashboard)
+        findings["memory_count"] = int(conn.execute("SELECT COUNT(*) FROM memories").fetchone()[0])
+        findings["active_memory_count"] = int(
+            conn.execute("SELECT COUNT(*) FROM memories WHERE status = 'active'").fetchone()[0]
+        )
+
+    # Compose result
+    result = {
+        "findings": findings,
+        "details": details,
+        "ok": not details,
+    }
+
+    print(json.dumps(result, indent=2))
+
+    # Write to project state unless dry-run
+    if not args.dry_run:
+        try:
+            import urllib.request
+            body = json.dumps({
+                "project": "atocore",
+                "category": "status",
+                "key": "integrity_check_result",
+                "value": json.dumps(result),
+                "source": "integrity check",
+            }).encode("utf-8")
+            req = urllib.request.Request(
+                f"{args.base_url}/project/state",
+                data=body,
+                method="POST",
+                headers={"Content-Type": "application/json"},
+            )
+            urllib.request.urlopen(req, timeout=10)
+        except Exception as e:
+            print(f"WARN: state write failed: {e}", file=sys.stderr)
+
+    # Raise an alert if anything drifted
+    if details:
+        emit_alert(
+            severity="warning",
+            title="Integrity drift detected",
+            message="; ".join(details),
+            context={k: v for k, v in findings.items() if not k.endswith("_count")},
+        )
+
+
+if __name__ == "__main__":
+    main()

src/atocore/api/routes.py

@@ -543,17 +543,33 @@ def api_update_memory(memory_id: str, req: MemoryUpdateRequest) -> dict:
 @router.delete("/memory/{memory_id}")
 def api_invalidate_memory(memory_id: str) -> dict:
     """Invalidate a memory (error correction)."""
-    success = invalidate_memory(memory_id)
+    success = invalidate_memory(memory_id, actor="api-http")
     if not success:
         raise HTTPException(status_code=404, detail="Memory not found")
     return {"status": "invalidated", "id": memory_id}
 
 
+@router.get("/memory/{memory_id}/audit")
+def api_memory_audit(memory_id: str, limit: int = 100) -> dict:
+    """Return the audit history for a specific memory (newest first)."""
+    from atocore.memory.service import get_memory_audit
+    entries = get_memory_audit(memory_id, limit=limit)
+    return {"memory_id": memory_id, "entries": entries, "count": len(entries)}
+
+
+@router.get("/admin/audit/recent")
+def api_recent_audit(limit: int = 50) -> dict:
+    """Return recent memory_audit entries across all memories (newest first)."""
+    from atocore.memory.service import get_recent_audit
+    entries = get_recent_audit(limit=limit)
+    return {"entries": entries, "count": len(entries)}
+
+
 @router.post("/memory/{memory_id}/promote")
 def api_promote_memory(memory_id: str) -> dict:
     """Promote a candidate memory to active (Phase 9 Commit C)."""
     try:
-        success = promote_memory(memory_id)
+        success = promote_memory(memory_id, actor="api-http")
     except ValueError as e:
         raise HTTPException(status_code=400, detail=str(e))
     if not success:
@@ -567,7 +583,7 @@ def api_promote_memory(memory_id: str) -> dict:
 @router.post("/memory/{memory_id}/reject")
 def api_reject_candidate_memory(memory_id: str) -> dict:
     """Reject a candidate memory (Phase 9 Commit C review queue)."""
-    success = reject_candidate_memory(memory_id)
+    success = reject_candidate_memory(memory_id, actor="api-http")
     if not success:
         raise HTTPException(
             status_code=404,
@@ -1046,33 +1062,47 @@ def api_dashboard() -> dict:
     # Pipeline health from project state
     pipeline: dict = {}
     extract_state: dict = {}
+    integrity: dict = {}
+    alerts: dict = {}
     try:
         state_entries = get_state("atocore")
         for entry in state_entries:
-            if entry.category != "status":
+            if entry.category == "status":
-                continue
+                if entry.key == "last_extract_batch_run":
-            if entry.key == "last_extract_batch_run":
+                    extract_state["last_run"] = entry.value
-                extract_state["last_run"] = entry.value
+                elif entry.key == "pipeline_last_run":
-            elif entry.key == "pipeline_last_run":
+                    pipeline["last_run"] = entry.value
-                pipeline["last_run"] = entry.value
+                    try:
+                        last = _dt.fromisoformat(entry.value.replace("Z", "+00:00"))
+                        delta = _dt.now(_tz.utc) - last
+                        pipeline["hours_since_last_run"] = round(
+                            delta.total_seconds() / 3600, 1
+                        )
+                    except Exception:
+                        pass
+                elif entry.key == "pipeline_summary":
+                    try:
+                        pipeline["summary"] = _json.loads(entry.value)
+                    except Exception:
+                        pipeline["summary_raw"] = entry.value
+                elif entry.key == "retrieval_harness_result":
+                    try:
+                        pipeline["harness"] = _json.loads(entry.value)
+                    except Exception:
+                        pipeline["harness_raw"] = entry.value
+                elif entry.key == "integrity_check_result":
+                    try:
+                        integrity = _json.loads(entry.value)
+                    except Exception:
+                        pass
+            elif entry.category == "alert":
+                # keys like "last_info", "last_warning", "last_critical"
                 try:
-                    last = _dt.fromisoformat(entry.value.replace("Z", "+00:00"))
+                    payload = _json.loads(entry.value)
-                    delta = _dt.now(_tz.utc) - last
-                    pipeline["hours_since_last_run"] = round(
-                        delta.total_seconds() / 3600, 1
-                    )
                 except Exception:
-                    pass
+                    payload = {"raw": entry.value}
-            elif entry.key == "pipeline_summary":
+                severity = entry.key.replace("last_", "")
-                try:
+                alerts[severity] = payload
-                    pipeline["summary"] = _json.loads(entry.value)
-                except Exception:
-                    pipeline["summary_raw"] = entry.value
-            elif entry.key == "retrieval_harness_result":
-                try:
-                    pipeline["harness"] = _json.loads(entry.value)
-                except Exception:
-                    pipeline["harness_raw"] = entry.value
     except Exception:
         pass
 
@@ -1107,6 +1137,14 @@ def api_dashboard() -> dict:
     elif len(candidates) > 20:
         triage["notice"] = f"{len(candidates)} candidates awaiting triage."
 
+    # Recent audit activity (Phase 4 V1) — last 10 mutations for operator
+    recent_audit: list[dict] = []
+    try:
+        from atocore.memory.service import get_recent_audit as _gra
+        recent_audit = _gra(limit=10)
+    except Exception:
+        pass
+
     return {
         "memories": {
             "active": len(active),
@@ -1123,6 +1161,9 @@ def api_dashboard() -> dict:
         "extraction_pipeline": extract_state,
         "pipeline": pipeline,
         "triage": triage,
+        "integrity": integrity,
+        "alerts": alerts,
+        "recent_audit": recent_audit,
     }
 
 

src/atocore/memory/service.py

@@ -67,6 +67,106 @@ class Memory:
     valid_until: str = ""  # ISO UTC; empty = permanent
 
 
+def _audit_memory(
+    memory_id: str,
+    action: str,
+    actor: str = "api",
+    before: dict | None = None,
+    after: dict | None = None,
+    note: str = "",
+) -> None:
+    """Append an entry to memory_audit.
+
+    Phase 4 Robustness V1. Every memory mutation flows through this
+    helper so we can answer "how did this memory get to its current
+    state?" and "when did we learn X?".
+
+    ``action`` is a short verb: created, updated, promoted, rejected,
+    superseded, invalidated, reinforced, auto_promoted, expired.
+    ``actor`` identifies the caller: api (default), auto-triage,
+    human-triage, host-cron, reinforcement, phase10-auto-promote,
+    etc. ``before`` / ``after`` are field snapshots (JSON-serialized).
+    Fail-open: a logging failure never breaks the mutation itself.
+    """
+    import json as _json
+    try:
+        with get_connection() as conn:
+            conn.execute(
+                "INSERT INTO memory_audit (id, memory_id, action, actor, "
+                "before_json, after_json, note) VALUES (?, ?, ?, ?, ?, ?, ?)",
+                (
+                    str(uuid.uuid4()),
+                    memory_id,
+                    action,
+                    actor or "api",
+                    _json.dumps(before or {}),
+                    _json.dumps(after or {}),
+                    (note or "")[:500],
+                ),
+            )
+    except Exception as e:
+        log.warning("memory_audit_failed", memory_id=memory_id, action=action, error=str(e))
+
+
+def get_memory_audit(memory_id: str, limit: int = 100) -> list[dict]:
+    """Fetch audit entries for a memory, newest first."""
+    import json as _json
+    with get_connection() as conn:
+        rows = conn.execute(
+            "SELECT id, memory_id, action, actor, before_json, after_json, note, timestamp "
+            "FROM memory_audit WHERE memory_id = ? ORDER BY timestamp DESC LIMIT ?",
+            (memory_id, limit),
+        ).fetchall()
+    out = []
+    for r in rows:
+        try:
+            before = _json.loads(r["before_json"] or "{}")
+        except Exception:
+            before = {}
+        try:
+            after = _json.loads(r["after_json"] or "{}")
+        except Exception:
+            after = {}
+        out.append({
+            "id": r["id"],
+            "memory_id": r["memory_id"],
+            "action": r["action"],
+            "actor": r["actor"] or "api",
+            "before": before,
+            "after": after,
+            "note": r["note"] or "",
+            "timestamp": r["timestamp"],
+        })
+    return out
+
+
+def get_recent_audit(limit: int = 50) -> list[dict]:
+    """Fetch recent memory_audit entries across all memories, newest first."""
+    import json as _json
+    with get_connection() as conn:
+        rows = conn.execute(
+            "SELECT id, memory_id, action, actor, before_json, after_json, note, timestamp "
+            "FROM memory_audit ORDER BY timestamp DESC LIMIT ?",
+            (limit,),
+        ).fetchall()
+    out = []
+    for r in rows:
+        try:
+            after = _json.loads(r["after_json"] or "{}")
+        except Exception:
+            after = {}
+        out.append({
+            "id": r["id"],
+            "memory_id": r["memory_id"],
+            "action": r["action"],
+            "actor": r["actor"] or "api",
+            "note": r["note"] or "",
+            "timestamp": r["timestamp"],
+            "content_preview": (after.get("content") or "")[:120],
+        })
+    return out
+
+
 def _normalize_tags(tags) -> list[str]:
     """Coerce a tags value (list, JSON string, None) to a clean lowercase list."""
     import json as _json
@@ -98,6 +198,7 @@ def create_memory(
     status: str = "active",
     domain_tags: list[str] | None = None,
     valid_until: str = "",
+    actor: str = "api",
 ) -> Memory:
     """Create a new memory entry.
 
@@ -160,6 +261,21 @@ def create_memory(
         valid_until=valid_until or "",
     )
 
+    _audit_memory(
+        memory_id=memory_id,
+        action="created",
+        actor=actor,
+        after={
+            "memory_type": memory_type,
+            "content": content,
+            "project": project,
+            "status": status,
+            "confidence": confidence,
+            "domain_tags": tags,
+            "valid_until": valid_until or "",
+        },
+    )
+
     return Memory(
         id=memory_id,
         memory_type=memory_type,
@@ -235,6 +351,8 @@ def update_memory(
     memory_type: str | None = None,
     domain_tags: list[str] | None = None,
     valid_until: str | None = None,
+    actor: str = "api",
+    note: str = "",
 ) -> bool:
     """Update an existing memory."""
     import json as _json
@@ -258,31 +376,48 @@ def update_memory(
             if duplicate:
                 raise ValueError("Update would create a duplicate active memory")
 
+        # Capture before-state for audit
+        before_snapshot = {
+            "content": existing["content"],
+            "status": existing["status"],
+            "confidence": existing["confidence"],
+            "memory_type": existing["memory_type"],
+        }
+        after_snapshot = dict(before_snapshot)
+
         updates = []
         params: list = []
 
         if content is not None:
             updates.append("content = ?")
             params.append(content)
+            after_snapshot["content"] = content
         if confidence is not None:
             updates.append("confidence = ?")
             params.append(confidence)
+            after_snapshot["confidence"] = confidence
         if status is not None:
             if status not in MEMORY_STATUSES:
                 raise ValueError(f"Invalid status '{status}'. Must be one of: {MEMORY_STATUSES}")
             updates.append("status = ?")
             params.append(status)
+            after_snapshot["status"] = status
         if memory_type is not None:
             if memory_type not in MEMORY_TYPES:
                 raise ValueError(f"Invalid memory type '{memory_type}'. Must be one of: {MEMORY_TYPES}")
             updates.append("memory_type = ?")
             params.append(memory_type)
+            after_snapshot["memory_type"] = memory_type
         if domain_tags is not None:
+            norm_tags = _normalize_tags(domain_tags)
             updates.append("domain_tags = ?")
-            params.append(_json.dumps(_normalize_tags(domain_tags)))
+            params.append(_json.dumps(norm_tags))
+            after_snapshot["domain_tags"] = norm_tags
         if valid_until is not None:
+            vu = valid_until.strip() or None
             updates.append("valid_until = ?")
-            params.append(valid_until.strip() or None)
+            params.append(vu)
+            after_snapshot["valid_until"] = vu or ""
 
         if not updates:
             return False
@@ -297,21 +432,40 @@ def update_memory(
 
     if result.rowcount > 0:
         log.info("memory_updated", memory_id=memory_id)
+        # Action verb is driven by status change when applicable; otherwise "updated"
+        if status == "active" and before_snapshot["status"] == "candidate":
+            action = "promoted"
+        elif status == "invalid" and before_snapshot["status"] == "candidate":
+            action = "rejected"
+        elif status == "invalid":
+            action = "invalidated"
+        elif status == "superseded":
+            action = "superseded"
+        else:
+            action = "updated"
+        _audit_memory(
+            memory_id=memory_id,
+            action=action,
+            actor=actor,
+            before=before_snapshot,
+            after=after_snapshot,
+            note=note,
+        )
         return True
     return False
 
 
-def invalidate_memory(memory_id: str) -> bool:
+def invalidate_memory(memory_id: str, actor: str = "api") -> bool:
     """Mark a memory as invalid (error correction)."""
-    return update_memory(memory_id, status="invalid")
+    return update_memory(memory_id, status="invalid", actor=actor)
 
 
-def supersede_memory(memory_id: str) -> bool:
+def supersede_memory(memory_id: str, actor: str = "api") -> bool:
     """Mark a memory as superseded (replaced by newer info)."""
-    return update_memory(memory_id, status="superseded")
+    return update_memory(memory_id, status="superseded", actor=actor)
 
 
-def promote_memory(memory_id: str) -> bool:
+def promote_memory(memory_id: str, actor: str = "api", note: str = "") -> bool:
     """Promote a candidate memory to active (Phase 9 Commit C review queue).
 
     Returns False if the memory does not exist or is not currently a
@@ -326,10 +480,10 @@ def promote_memory(memory_id: str) -> bool:
         return False
     if row["status"] != "candidate":
         return False
-    return update_memory(memory_id, status="active")
+    return update_memory(memory_id, status="active", actor=actor, note=note)
 
 
-def reject_candidate_memory(memory_id: str) -> bool:
+def reject_candidate_memory(memory_id: str, actor: str = "api", note: str = "") -> bool:
     """Reject a candidate memory (Phase 9 Commit C).
 
     Sets the candidate's status to ``invalid`` so it drops out of the
@@ -344,7 +498,7 @@ def reject_candidate_memory(memory_id: str) -> bool:
         return False
     if row["status"] != "candidate":
         return False
-    return update_memory(memory_id, status="invalid")
+    return update_memory(memory_id, status="invalid", actor=actor, note=note)
 
 
 def reinforce_memory(
@@ -385,6 +539,17 @@ def reinforce_memory(
         old_confidence=round(old_confidence, 4),
         new_confidence=round(new_confidence, 4),
     )
+    # Reinforcement writes an audit row per bump. Reinforcement fires often
+    # (every captured interaction); this lets you trace which interactions
+    # kept which memories alive. Could become chatty but is invaluable for
+    # decay/cold-memory analysis. If it becomes an issue, throttle here.
+    _audit_memory(
+        memory_id=memory_id,
+        action="reinforced",
+        actor="reinforcement",
+        before={"confidence": old_confidence},
+        after={"confidence": new_confidence},
+    )
     return True, old_confidence, new_confidence
 
 
@@ -420,7 +585,11 @@ def auto_promote_reinforced(
 
     for row in rows:
         mid = row["id"]
-        ok = promote_memory(mid)
+        ok = promote_memory(
+            mid,
+            actor="phase10-auto-promote",
+            note=f"ref_count={row['reference_count']} confidence={row['confidence']:.2f}",
+        )
         if ok:
             promoted.append(mid)
             log.info(
@@ -459,7 +628,11 @@ def expire_stale_candidates(
 
     for row in rows:
         mid = row["id"]
-        ok = reject_candidate_memory(mid)
+        ok = reject_candidate_memory(
+            mid,
+            actor="candidate-expiry",
+            note=f"unreinforced for {max_age_days}+ days",
+        )
         if ok:
             expired.append(mid)
             log.info("memory_expired", memory_id=mid)

src/atocore/models/database.py

@@ -136,6 +136,30 @@ def _apply_migrations(conn: sqlite3.Connection) -> None:
         "CREATE INDEX IF NOT EXISTS idx_memories_valid_until ON memories(valid_until)"
     )
 
+    # Phase 4 (Robustness V1): append-only audit log for memory mutations.
+    # Every create/update/promote/reject/supersede/invalidate/reinforce/expire/
+    # auto_promote writes one row here. before/after are JSON snapshots of the
+    # relevant fields. actor lets us distinguish auto-triage vs human-triage vs
+    # api vs cron. This is the "how did this memory get to its current state"
+    # trail — essential once the brain starts auto-organizing itself.
+    conn.execute(
+        """
+        CREATE TABLE IF NOT EXISTS memory_audit (
+            id TEXT PRIMARY KEY,
+            memory_id TEXT NOT NULL,
+            action TEXT NOT NULL,
+            actor TEXT DEFAULT 'api',
+            before_json TEXT DEFAULT '{}',
+            after_json TEXT DEFAULT '{}',
+            note TEXT DEFAULT '',
+            timestamp DATETIME DEFAULT CURRENT_TIMESTAMP
+        )
+        """
+    )
+    conn.execute("CREATE INDEX IF NOT EXISTS idx_memory_audit_memory ON memory_audit(memory_id)")
+    conn.execute("CREATE INDEX IF NOT EXISTS idx_memory_audit_timestamp ON memory_audit(timestamp)")
+    conn.execute("CREATE INDEX IF NOT EXISTS idx_memory_audit_action ON memory_audit(action)")
+
     # Phase 9 Commit A: capture loop columns on the interactions table.
     # The original schema only carried prompt + project_id + a context_pack
     # JSON blob. To make interactions a real audit trail of what AtoCore fed

src/atocore/observability/alerts.py

@@ -0,0 +1,170 @@
+"""Alert emission framework (Phase 4 Robustness V1).
+
+One-stop helper to raise operational alerts from any AtoCore code
+path. An alert is a structured message about something the operator
+should see — harness regression, queue pileup, integrity drift,
+pipeline skipped, etc.
+
+Emission fans out to multiple sinks so a single call touches every
+observability channel:
+
+  1. structlog logger (always)
+  2. Append to ``$ATOCORE_ALERT_LOG`` (default ~/atocore-logs/alerts.log)
+  3. Write the last alert of each severity to AtoCore project state
+     (atocore/alert/last_{severity}) so the dashboard can surface it
+  4. POST to ``$ATOCORE_ALERT_WEBHOOK`` if set (Discord/Slack/generic)
+
+All sinks are fail-open — if one fails the others still fire.
+
+Severity levels (inspired by syslog but simpler):
+  - ``info``      operational event worth noting
+  - ``warning``   degraded state, service still works
+  - ``critical``  something is broken and needs attention
+
+Environment variables:
+  ATOCORE_ALERT_LOG      override the alerts log file path
+  ATOCORE_ALERT_WEBHOOK  POST JSON alerts here (Discord webhook, etc.)
+  ATOCORE_BASE_URL       AtoCore API for project-state write (default localhost:8100)
+"""
+
+from __future__ import annotations
+
+import json
+import os
+import threading
+import urllib.error
+import urllib.request
+from datetime import datetime, timezone
+from pathlib import Path
+
+from atocore.observability.logger import get_logger
+
+log = get_logger("alerts")
+
+SEVERITIES = {"info", "warning", "critical"}
+
+
+def _default_alert_log() -> Path:
+    explicit = os.environ.get("ATOCORE_ALERT_LOG")
+    if explicit:
+        return Path(explicit)
+    return Path.home() / "atocore-logs" / "alerts.log"
+
+
+def _append_log(severity: str, title: str, message: str, context: dict | None) -> None:
+    path = _default_alert_log()
+    try:
+        path.parent.mkdir(parents=True, exist_ok=True)
+        ts = datetime.now(timezone.utc).strftime("%Y-%m-%dT%H:%M:%SZ")
+        line = f"[{ts}] [{severity.upper()}] {title}: {message}"
+        if context:
+            line += f"  {json.dumps(context, ensure_ascii=True)[:500]}"
+        line += "\n"
+        with open(path, "a", encoding="utf-8") as f:
+            f.write(line)
+    except Exception as e:
+        log.warning("alert_log_write_failed", error=str(e))
+
+
+def _write_state(severity: str, title: str, message: str, ts: str) -> None:
+    """Record the most-recent alert per severity into project_state.
+
+    Uses the internal ``set_state`` helper directly so we work even
+    when the HTTP API isn't available (e.g. called from cron scripts
+    that import atocore as a library).
+    """
+    try:
+        from atocore.context.project_state import set_state
+
+        set_state(
+            project_name="atocore",
+            category="alert",
+            key=f"last_{severity}",
+            value=json.dumps({"title": title, "message": message[:400], "timestamp": ts}),
+            source="alert framework",
+        )
+    except Exception as e:
+        log.warning("alert_state_write_failed", error=str(e))
+
+
+def _post_webhook(severity: str, title: str, message: str, context: dict | None, ts: str) -> None:
+    url = os.environ.get("ATOCORE_ALERT_WEBHOOK")
+    if not url:
+        return
+
+    # Auto-detect Discord webhook shape for nicer formatting
+    if "discord.com/api/webhooks" in url or "discordapp.com/api/webhooks" in url:
+        emoji = {"info": ":information_source:", "warning": ":warning:", "critical": ":rotating_light:"}.get(severity, "")
+        body = {
+            "content": f"{emoji} **AtoCore {severity}**: {title}",
+            "embeds": [{
+                "description": message[:1800],
+                "timestamp": ts,
+                "fields": [
+                    {"name": k, "value": str(v)[:200], "inline": True}
+                    for k, v in (context or {}).items()
+                ][:10],
+            }],
+        }
+    else:
+        body = {
+            "severity": severity,
+            "title": title,
+            "message": message,
+            "context": context or {},
+            "timestamp": ts,
+        }
+
+    def _fire():
+        try:
+            req = urllib.request.Request(
+                url,
+                data=json.dumps(body).encode("utf-8"),
+                method="POST",
+                headers={"Content-Type": "application/json"},
+            )
+            urllib.request.urlopen(req, timeout=8)
+        except Exception as e:
+            log.warning("alert_webhook_failed", error=str(e))
+
+    threading.Thread(target=_fire, daemon=True).start()
+
+
+def emit_alert(
+    severity: str,
+    title: str,
+    message: str,
+    context: dict | None = None,
+) -> None:
+    """Emit an alert to all configured sinks.
+
+    Fail-open: any single sink failure is logged but does not prevent
+    other sinks from firing.
+    """
+    severity = (severity or "info").lower()
+    if severity not in SEVERITIES:
+        severity = "info"
+
+    ts = datetime.now(timezone.utc).strftime("%Y-%m-%dT%H:%M:%SZ")
+
+    # Sink 1: structlog — always
+    logger_fn = {
+        "info": log.info,
+        "warning": log.warning,
+        "critical": log.error,
+    }[severity]
+    logger_fn("alert", title=title, message=message[:500], **(context or {}))
+
+    # Sinks 2-4: fail-open, each wrapped
+    try:
+        _append_log(severity, title, message, context)
+    except Exception:
+        pass
+    try:
+        _write_state(severity, title, message, ts)
+    except Exception:
+        pass
+    try:
+        _post_webhook(severity, title, message, context, ts)
+    except Exception:
+        pass

tests/test_alerts.py

@@ -0,0 +1,58 @@
+"""Tests for the Phase 4 alerts framework."""
+
+from __future__ import annotations
+
+import os
+import tempfile
+from pathlib import Path
+
+import pytest
+
+import atocore.config as _config
+
+
+@pytest.fixture(autouse=True)
+def isolated_env(monkeypatch):
+    """Isolate alerts sinks per test."""
+    tmpdir = tempfile.mkdtemp()
+    log_file = Path(tmpdir) / "alerts.log"
+    monkeypatch.setenv("ATOCORE_ALERT_LOG", str(log_file))
+    monkeypatch.delenv("ATOCORE_ALERT_WEBHOOK", raising=False)
+
+    # Data dir for any state writes
+    monkeypatch.setenv("ATOCORE_DATA_DIR", tmpdir)
+    _config.settings = _config.Settings()
+
+    from atocore.models.database import init_db
+    init_db()
+
+    yield {"tmpdir": tmpdir, "log_file": log_file}
+
+
+def test_emit_alert_writes_log_file(isolated_env):
+    from atocore.observability.alerts import emit_alert
+
+    emit_alert("warning", "test title", "test message body", context={"count": 5})
+
+    content = isolated_env["log_file"].read_text(encoding="utf-8")
+    assert "test title" in content
+    assert "test message body" in content
+    assert "WARNING" in content
+    assert '"count": 5' in content
+
+
+def test_emit_alert_invalid_severity_falls_back_to_info(isolated_env):
+    from atocore.observability.alerts import emit_alert
+
+    emit_alert("made-up-severity", "t", "m")
+    content = isolated_env["log_file"].read_text(encoding="utf-8")
+    assert "INFO" in content
+
+
+def test_emit_alert_fails_open_on_log_write_error(monkeypatch, isolated_env):
+    """An unwritable log path should not crash the emit."""
+    from atocore.observability.alerts import emit_alert
+
+    monkeypatch.setenv("ATOCORE_ALERT_LOG", "/nonexistent/path/that/definitely/is/not/writable/alerts.log")
+    # Must not raise
+    emit_alert("info", "t", "m")

tests/test_memory.py

@@ -264,6 +264,82 @@ def test_expire_stale_candidates(isolated_db):
     assert mem["status"] == "invalid"
 
 
+# --- Phase 4: memory_audit log ---
+
+
+def test_audit_create_logs_entry(isolated_db):
+    from atocore.memory.service import create_memory, get_memory_audit
+
+    mem = create_memory("knowledge", "test content for audit", actor="test-harness")
+    audit = get_memory_audit(mem.id)
+    assert len(audit) >= 1
+    latest = audit[0]
+    assert latest["action"] == "created"
+    assert latest["actor"] == "test-harness"
+    assert latest["after"]["content"] == "test content for audit"
+
+
+def test_audit_promote_logs_entry(isolated_db):
+    from atocore.memory.service import create_memory, get_memory_audit, promote_memory
+
+    mem = create_memory("knowledge", "candidate for promote", status="candidate")
+    promote_memory(mem.id, actor="test-triage")
+    audit = get_memory_audit(mem.id)
+    actions = [a["action"] for a in audit]
+    assert "promoted" in actions
+    promote_entry = next(a for a in audit if a["action"] == "promoted")
+    assert promote_entry["actor"] == "test-triage"
+    assert promote_entry["before"]["status"] == "candidate"
+    assert promote_entry["after"]["status"] == "active"
+
+
+def test_audit_reject_logs_entry(isolated_db):
+    from atocore.memory.service import create_memory, get_memory_audit, reject_candidate_memory
+
+    mem = create_memory("knowledge", "candidate for reject", status="candidate")
+    reject_candidate_memory(mem.id, actor="test-triage", note="stale")
+    audit = get_memory_audit(mem.id)
+    actions = [a["action"] for a in audit]
+    assert "rejected" in actions
+    reject_entry = next(a for a in audit if a["action"] == "rejected")
+    assert reject_entry["note"] == "stale"
+
+
+def test_audit_update_captures_before_after(isolated_db):
+    from atocore.memory.service import create_memory, get_memory_audit, update_memory
+
+    mem = create_memory("knowledge", "original content", confidence=0.5)
+    update_memory(mem.id, content="updated content", confidence=0.9, actor="human-edit")
+    audit = get_memory_audit(mem.id)
+    update_entries = [a for a in audit if a["action"] == "updated"]
+    assert len(update_entries) >= 1
+    u = update_entries[0]
+    assert u["before"]["content"] == "original content"
+    assert u["after"]["content"] == "updated content"
+    assert u["before"]["confidence"] == 0.5
+    assert u["after"]["confidence"] == 0.9
+
+
+def test_audit_reinforce_logs_entry(isolated_db):
+    from atocore.memory.service import create_memory, get_memory_audit, reinforce_memory
+
+    mem = create_memory("knowledge", "reinforced mem", confidence=0.5)
+    reinforce_memory(mem.id, confidence_delta=0.02)
+    audit = get_memory_audit(mem.id)
+    actions = [a["action"] for a in audit]
+    assert "reinforced" in actions
+
+
+def test_recent_audit_returns_cross_memory_entries(isolated_db):
+    from atocore.memory.service import create_memory, get_recent_audit
+
+    m1 = create_memory("knowledge", "mem one content", actor="harness")
+    m2 = create_memory("knowledge", "mem two content", actor="harness")
+    recent = get_recent_audit(limit=10)
+    ids = {e["memory_id"] for e in recent}
+    assert m1.id in ids and m2.id in ids
+
+
 # --- Phase 3: domain_tags + valid_until ---