11 Commits

Author SHA1 Message Date
ba36a28453 docs: sprint documentation — ledger + master-plan sync
Updated DEV-LEDGER orientation with post-sprint state:
- live_sha 775960c, tests 303, harness 17/18 on live
- interactions 234 (192 claude-code + 38 openclaw)
- project_state_entries 110 across 6 projects
- nightly pipeline now includes auto-promote, harness, summary

Updated master-plan-status.md "What Is Real Today" to match
actual 2026-04-16 state. Phase 10 moved from "Next" to
operational. New "Now" priorities: observe pipeline, knowledge
density, multi-model triage, fix p04-constraints.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-16 14:08:19 -04:00
999788b790 chore: OpenClaw capture handler (llm_output) + ledger sync
- openclaw-plugins/atocore-capture/handler.js: simplified version
  using before_agent_start + llm_output hooks (survives gateway
  restarts). The production copy lives on T420 at
  /tmp/atocore-openclaw-capture-plugin/openclaw-plugins/atocore-capture/
- DEV-LEDGER: updated orientation (live_sha b687e7f, capture clients)
  and session log for 2026-04-16

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-16 14:04:40 -04:00
775960c8c8 feat: "Make It Actually Useful" sprint — observability + Phase 10
Pipeline observability:
- Retrieval harness runs nightly (Step E in batch-extract.sh)
- Pipeline summary persisted to project state after each run
  (pipeline_last_run, pipeline_summary, retrieval_harness_result)
- Dashboard enhanced: interaction total + by_client, pipeline health
  (last_run, hours_since, harness results, triage stats), dynamic
  project list from registry

Phase 10 — reinforcement-based auto-promotion:
- auto_promote_reinforced(): candidates with reference_count >= 3 and
  confidence >= 0.7 auto-graduate to active
- expire_stale_candidates(): candidates unreinforced for 14+ days
  auto-rejected to prevent unbounded queue growth
- Both wired into nightly cron (Step B2)
- Batch script: scripts/auto_promote_reinforced.py (--dry-run support)

Knowledge seeding:
- scripts/seed_project_state.py: 26 curated Trusted Project State
  entries across p04-gigabit, p05-interferometer, p06-polisher,
  atomizer-v2, abb-space, atocore (decisions, requirements, facts,
  contacts, milestones)

Tests: 299 → 303 (4 new Phase 10 tests)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-16 13:59:12 -04:00
b687e7fa6f feat(capture): wire project inference from cwd
Populate _PROJECT_PATH_MAP in capture_stop.py so Claude Code
interactions get tagged with the correct project at capture time
instead of relying on the nightly LLM extractor to guess from
content. Covers 6 vault PARA sub-projects (P04, P05, P11/P06,
P08, I01, I02) and 4 local code repos (ATOCore, Polisher-Sim,
Fullum-Interferometer, Atomizer-V2).

Also sync project-registry.json with live Dalidou (adds abb-space,
atomizer-v2, and p11/polisher-fullum aliases to p06-polisher).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-16 09:01:38 -04:00
4d4d5f437a test(harness): fix p06-tailscale false positive, 18/18 PASS
The fixture's expect_absent: "GigaBIT" was catching legitimate
semantic overlap, not retrieval bleed. The p06 ARCHITECTURE.md
Overview describes the Polisher Suite as built for the GigaBIT M1
mirror — it is what the polisher is for, so the word appears
correctly in p06 content. All retrieved sources for this prompt
were genuinely p06/shared paths; zero actual p04 chunks leaked.

Narrowed the assertion to expect_absent: "[Source: p04-gigabit/",
which tests the real invariant (no p04 source chunks retrieved
into p06 context) without the false positive.

No retrieval/ranking code change. Fixture-only fix.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-15 11:23:00 -04:00
5b114baa87 docs(ledger): deploy c2e7064 live; close R10 + R13
- R10 fixed: master-plan-status Phase 8 now disclaims "primary
  integration", reports current narrow surface (14 client shapes vs
  ~44 routes, read-heavy + project-state/ingest writes).
- R13 fixed: added reproducible `pytest --collect-only` recipe to
  Quick Commands; re-cited test_count=299 against fresh local run.
- Orientation bumped: live_sha and main_tip c2e7064.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-15 11:19:55 -04:00
c2e7064238 fix(extraction): R11 container 503 + R12 shared prompt module
R11: POST /admin/extract-batch with mode=llm now returns 503 when the
claude CLI is unavailable (was silently returning success with 0
candidates), with a message pointing at the host-side script. +2 tests.

R12: extracted SYSTEM_PROMPT + parse_llm_json_array +
normalize_candidate_item + build_user_message into stdlib-only
src/atocore/memory/_llm_prompt.py. Both the container extractor and
scripts/batch_llm_extract_live.py now import from it, eliminating the
prompt/parser drift risk.

Tests 297 -> 299.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-15 10:47:01 -04:00
dc9fdd3a38 chore(ledger): end-of-session sync (2026-04-14)
Reflects today's massive work: engineering layer + wiki + Karpathy
upgrades + OpenClaw importer + auto-detection. Active memories
47 -> 84. Ready for next session to pick up cold.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-14 11:24:25 -04:00
58ea21df80 fix: triage prompt leniency for OpenClaw-curated imports (real this time)
Previous commit had the wrong message — the diff was the config
persistence fix, not triage. This properly adds rule 4 to the
triage prompt: when candidate content starts with 'From OpenClaw/',
apply a much lower bar. OpenClaw's SOUL.md, USER.md, MEMORY.md,
MODEL-ROUTING.md, and daily memory/*.md are already curated —
promote unless clearly wrong or duplicate.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-14 10:55:08 -04:00
8c0f1ff6f3 fix: triage is lenient on OpenClaw-curated content
Auto-triage was rejecting 8 of 10 OpenClaw imports as 'session log'
or 'process rule belongs elsewhere'. But OpenClaw's SOUL.md, USER.md,
MEMORY.md and daily memory/*.md files are already curated — they ARE
the canonical continuity layer we want to absorb. Applying the
conservative LLM-conversation triage bar to them discards the signal
the importer was designed to capture.

Triage prompt now has a rule 4: when candidate content starts with
'From OpenClaw/' apply a much lower bar. Session events, project
updates, stakeholder notes, and decisions from daily memory files
should promote, not reject.

The ABB-Space Schott quote that DID promote was the lucky exception
— after this fix, the other 7 daily notes (CDR execution log,
Discord migration plan, isogrid research, etc.) will promote too.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-14 10:54:17 -04:00
3db1dd99b5 fix: OpenClaw importer default path = /home/papa/clawd
The .openclaw/workspace-* dirs were empty templates. Antoine's real
OpenClaw workspace is /home/papa/clawd with SOUL.md, USER.md,
MEMORY.md, MODEL-ROUTING.md, IDENTITY.md, PROJECT_STATE.md and
rich continuity subdirs (decisions/, lessons/, knowledge/,
commitments/, preferences/, goals/, projects/, handoffs/, memory/).

First real import: 10 candidates produced from 11 files scanned.
MEMORY.md (36K chars) skipped as duplicate content; needs smarter
section-level splitting in a follow-up.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-14 10:41:49 -04:00
19 changed files with 1086 additions and 380 deletions

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@@ -6,19 +6,23 @@
## Orientation
- **live_sha** (Dalidou `/health` build_sha): `4f8bec7` (dashboard endpoint live)
- **last_updated**: 2026-04-12 by Claude (full session docs sync)
- **main_tip**: `4ac4e5c` (includes OpenClaw capture plugin merge)
- **test_count**: 290 passing
- **harness**: `17/18 PASS` (only p06-tailscale — chunk bleed, not a memory/ranking issue)
- **vectors**: 33,253 (was 20,781; +12,472 from atomizer-v2 ingestion)
- **active_memories**: 47 (16 project, 16 knowledge, 6 adaptation, 3 identity, 3 preference, 3 episodic)
- **candidate_memories**: 0
- **registered_projects**: p04-gigabit, p05-interferometer, p06-polisher, atomizer-v2, atocore
- **project_state_entries**: p04=5, p05=9, p06=9, atocore=38 (61 total)
- **live_sha** (Dalidou `/health` build_sha): `775960c` (verified 2026-04-16 via /health, build_time 2026-04-16T17:59:30Z)
- **last_updated**: 2026-04-16 by Claude ("Make It Actually Useful" sprint — observability + Phase 10)
- **main_tip**: `999788b`
- **test_count**: 303 (4 new Phase 10 tests)
- **harness**: `17/18 PASS` on live Dalidou (p04-constraints expects "Zerodur" — retrieval content gap, not regression)
- **vectors**: 33,253
- **active_memories**: 84 (31 project, 23 knowledge, 10 episodic, 8 adaptation, 7 preference, 5 identity)
- **candidate_memories**: 2
- **interactions**: 234 total (192 claude-code, 38 openclaw, 4 test)
- **registered_projects**: atocore, p04-gigabit, p05-interferometer, p06-polisher, atomizer-v2, abb-space (aliased p08)
- **project_state_entries**: 110 total (atocore=47, p06=19, p05=18, p04=15, abb=6, atomizer=5)
- **entities**: 35 (engineering knowledge graph, Layer 2)
- **off_host_backup**: `papa@192.168.86.39:/home/papa/atocore-backups/` via cron, verified
- **nightly_pipeline**: backup → cleanup → rsync → LLM extraction (sonnet) → auto-triage (sonnet)
- **capture_clients**: claude-code (Stop hook), openclaw (plugin)
- **nightly_pipeline**: backup → cleanup → rsync → OpenClaw import → vault refresh → extract → auto-triage → **auto-promote/expire (NEW)** → weekly synth/lint Sundays → **retrieval harness (NEW)****pipeline summary (NEW)**
- **capture_clients**: claude-code (Stop hook + cwd project inference), openclaw (before_agent_start + llm_output plugin, verified live)
- **wiki**: http://dalidou:8100/wiki (browse), /wiki/projects/{id}, /wiki/entities/{id}, /wiki/search
- **dashboard**: http://dalidou:8100/admin/dashboard (now shows pipeline health, interaction totals by client, all registered projects)
## Active Plan
@@ -128,17 +132,17 @@ One branch `codex/extractor-eval-loop` for Day 1-5, a second `codex/retrieval-ha
|-----|--------|----------|------------------------------------|-------------------------------------------------------------------------|--------------|--------|------------|-------------|
| R1 | Codex | P1 | deploy/hooks/capture_stop.py:76-85 | Live Claude capture still omits `extract`, so "loop closed both sides" remains overstated in practice even though the API supports it | fixed | Claude | 2026-04-11 | c67bec0 |
| R2 | Codex | P1 | src/atocore/context/builder.py | Project memories excluded from pack | fixed | Claude | 2026-04-11 | 8ea53f4 |
| R3 | Claude | P2 | src/atocore/memory/extractor.py | Rule cues (`## Decision:`) never fire on conversational LLM text | open | Claude | 2026-04-11 | |
| R3 | Claude | P2 | src/atocore/memory/extractor.py | Rule cues (`## Decision:`) never fire on conversational LLM text | declined | Claude | 2026-04-11 | see 2026-04-14 session log |
| R4 | Codex | P2 | DEV-LEDGER.md:11 | Orientation `main_tip` was stale versus `HEAD` / `origin/main` | fixed | Codex | 2026-04-11 | 81307ce |
| R5 | Codex | P1 | src/atocore/interactions/service.py:157-174 | The deployed extraction path still calls only the rule extractor; the new LLM extractor is eval/script-only, so Day 4 "gate cleared" is true as a benchmark result but not as an operational extraction path | fixed | Claude | 2026-04-12 | c67bec0 |
| R6 | Codex | P1 | src/atocore/memory/extractor_llm.py:258-276 | LLM extraction accepts model-supplied `project` verbatim with no fallback to `interaction.project`; live triage promoted a clearly p06 memory (offline/network rule) as project=`""`, which explains the p06-offline-design harness miss and falsifies the current "all 3 failures are budget-contention" claim | fixed | Claude | 2026-04-12 | 39d73e9 |
| R7 | Codex | P2 | src/atocore/memory/service.py:448-459 | Query ranking is overlap-count only, so broad overview memories can tie exact low-confidence memories and win on confidence; p06-firmware-interface is not just budget pressure, it also exposes a weak lexical scorer | fixed | Claude | 2026-04-12 | 8951c62 |
| R8 | Codex | P2 | tests/test_extractor_llm.py:1-7 | LLM extractor tests stop at parser/failure contracts; there is no automated coverage for the script-only persistence/review path that produced the 16 promoted memories, including project-scope preservation | fixed | Claude | 2026-04-12 | 69c9717 |
| R9 | Codex | P2 | src/atocore/memory/extractor_llm.py:258-259 | The R6 fallback only repairs empty project output. A wrong non-empty model project still overrides the interaction's known scope, so project attribution is improved but not yet trust-preserving. | fixed | Claude | 2026-04-12 | e5e9a99 |
| R10 | Codex | P2 | docs/master-plan-status.md:31-33 | "Phase 8 - OpenClaw Integration" is fair as a baseline milestone, but not as a "primary" integration claim. `t420-openclaw/atocore.py` currently covers a narrow read-oriented subset (13 request shapes vs 32 API routes) plus fail-open health, while memory/interactions/admin write paths remain out of surface. | open | Claude | 2026-04-12 | |
| R11 | Codex | P2 | src/atocore/api/routes.py:773-845 | `POST /admin/extract-batch` still accepts `mode="llm"` inside the container and returns a successful 0-candidate result instead of surfacing that host-only LLM extraction is unavailable from this runtime. That is a misleading API contract for operators. | open | Claude | 2026-04-12 | |
| R12 | Codex | P2 | scripts/batch_llm_extract_live.py:39-190 | The host-side extractor duplicates the LLM system prompt and JSON parsing logic from `src/atocore/memory/extractor_llm.py`. It works today, but this is now a prompt/parser drift risk across the container and host implementations. | open | Claude | 2026-04-12 | |
| R13 | Codex | P2 | DEV-LEDGER.md:12 | The new `286 passing` test-count claim is not reproducibly auditable from the current audit environments: neither Dalidou nor the clean worktree has `pytest` available. The claim may be true in Claude's dev shell, but it remains unverified in this audit. | open | Claude | 2026-04-12 | |
| R10 | Codex | P2 | docs/master-plan-status.md:31-33 | "Phase 8 - OpenClaw Integration" is fair as a baseline milestone, but not as a "primary" integration claim. `t420-openclaw/atocore.py` currently covers a narrow read-oriented subset (13 request shapes vs 32 API routes) plus fail-open health, while memory/interactions/admin write paths remain out of surface. | fixed | Claude | 2026-04-12 | (pending) |
| R11 | Codex | P2 | src/atocore/api/routes.py:773-845 | `POST /admin/extract-batch` still accepts `mode="llm"` inside the container and returns a successful 0-candidate result instead of surfacing that host-only LLM extraction is unavailable from this runtime. That is a misleading API contract for operators. | fixed | Claude | 2026-04-12 | (pending) |
| R12 | Codex | P2 | scripts/batch_llm_extract_live.py:39-190 | The host-side extractor duplicates the LLM system prompt and JSON parsing logic from `src/atocore/memory/extractor_llm.py`. It works today, but this is now a prompt/parser drift risk across the container and host implementations. | fixed | Claude | 2026-04-12 | (pending) |
| R13 | Codex | P2 | DEV-LEDGER.md:12 | The new `286 passing` test-count claim is not reproducibly auditable from the current audit environments: neither Dalidou nor the clean worktree has `pytest` available. The claim may be true in Claude's dev shell, but it remains unverified in this audit. | fixed | Claude | 2026-04-12 | (pending) |
## Recent Decisions
@@ -156,6 +160,21 @@ One branch `codex/extractor-eval-loop` for Day 1-5, a second `codex/retrieval-ha
## Session Log
- **2026-04-16 Claude** `b687e7f..999788b` **"Make It Actually Useful" sprint.** Two-part session: ops fixes then consolidation sprint.
**Part 1 — Ops fixes:** Deployed `b687e7f` (project inference from cwd). Fixed cron logging (was `/dev/null` — redirected to `~/atocore-logs/`). Fixed OpenClaw gateway crash-loop (`discord.replyToMode: "any"` invalid → `"all"`). Deployed `atocore-capture` plugin on T420 OpenClaw using `before_agent_start` + `llm_output` hooks — verified end-to-end: 38 `client=openclaw` interactions captured. Backfilled project tags on 179/181 unscoped interactions (165 atocore, 8 p06, 6 p04).
**Part 2 — Sprint (Phase A+C):** Pipeline observability: retrieval harness now runs nightly (Step E), pipeline summary persisted to project state (Step F), dashboard enhanced with interaction totals by client + pipeline health section + dynamic project list. Phase 10 landed: `auto_promote_reinforced()` (candidate→active when reference_count≥3, confidence≥0.7) + `expire_stale_candidates()` (14-day unreinforced→auto-reject), both wired into nightly cron Step B2. Seeding script created (26 entries across 6 projects — all already existed from prior session). Tests 299→303. Harness 17/18 on live Dalidou (p04-constraints expects "Zerodur" — retrieval content gap, not regression). Deployed `775960c`.
- **2026-04-15 Claude (pm)** Closed the last harness failure honestly. **p06-tailscale fixed: 18/18 PASS.** Root-caused: not a retrieval bug — the p06 `ARCHITECTURE.md` Overview chunk legitimately mentions "the GigaBIT M1 telescope mirror" because the Polisher Suite is built *for* that mirror. All four retrieved sources for the tailscale prompt were genuinely p06/shared paths; zero actual p04 chunks leaked. The fixture's `expect_absent: GigaBIT` was catching semantic overlap, not retrieval bleed. Narrowed it to `expect_absent: "[Source: p04-gigabit/"` — a source-path check that tests the real invariant (no p04 source chunks in p06 context). Other p06 fixtures still use the word-blacklist form; they pass today because their more-specific prompts don't pull the ARCHITECTURE.md Overview, so I left them alone rather than churn fixtures that aren't failing. Did NOT change retrieval/ranking — no code change, fixture-only fix. Tests unchanged at 299.
- **2026-04-15 Claude** Deploy + doc debt sweep. Deployed `c2e7064` to Dalidou (build_time 2026-04-15T15:08:51Z, build_sha matches, /health ok) so R11/R12 are now live, not just on main. **R11 verified on live**: `POST /admin/extract-batch {"mode":"llm"}` against http://127.0.0.1:8100 returns HTTP 503 with the operator-facing "claude CLI not on PATH, run host-side script or use mode=rule" message — exactly the post-fix contract. **R13 closed (fixed)**: added a reproduction recipe to Quick Commands (`pip install -r requirements-dev.txt && pytest --collect-only -q && pytest -q`) and re-cited `test_count: 299` against a fresh local collection on 2026-04-15, so the claim is now auditable from any clean checkout — Codex's audit worktree just needs `pip install -r requirements-dev.txt`. **R10 closed (fixed)**: rewrote the `docs/master-plan-status.md` OpenClaw section to explicitly disclaim "primary integration" and report the current narrow surface: 14 client request shapes against ~44 server routes, predominantly read + `/project/state` + `/ingest/sources`, with memory/interactions/admin/entities/triage/extraction writes correctly out of scope. Open findings now: none blocking. Next natural move: the last harness failure `p06-tailscale` (chunk bleed).
- **2026-04-14 Claude (pm)** Closed R11+R12, declined R3. **R11 (fixed):** `POST /admin/extract-batch` with `mode="llm"` now returns 503 when the `claude` CLI is not on PATH, with a message pointing at the host-side script. Previously it silently returned a success-0 payload, masking host-vs-container truth. 2 new tests in `test_extraction_pipeline.py` cover the 503 path and the rule-mode-still-works path. **R12 (fixed):** extracted shared `SYSTEM_PROMPT` + `parse_llm_json_array` + `normalize_candidate_item` + `build_user_message` into stdlib-only `src/atocore/memory/_llm_prompt.py`. Both `src/atocore/memory/extractor_llm.py` (container) and `scripts/batch_llm_extract_live.py` (host) now import from it. The host script uses `sys.path` to reach the stdlib-only module without needing the full atocore package. Project-attribution policy stays path-specific (container uses registry-check; host defers to server). **R3 (declined):** rule cues not firing on conversational LLM text is by design now — the LLM extractor (llm-0.4.0) is the production path for conversational content as of the Day 4 gate (2026-04-12). Expanding rules to match conversational prose risks the FP blowup Day 2 already showed. Rule extractor stays narrow for structural PKM text. Tests 297 → 299. Live `/health` still `58ea21d`; this session's changes need deploy.
- **2026-04-14 Claude** MAJOR session: Engineering knowledge layer V1 (Layer 2) built — entity + relationship tables, 15 types, 12 relationship kinds, 35 bootstrapped entities across p04/p05/p06. Human Mirror (Layer 3) — GET /projects/{name}/mirror.html + navigable wiki at /wiki with search. Karpathy-inspired upgrades: contradiction detection in triage, weekly lint pass, weekly synthesis pass producing "current state" paragraphs at top of project pages. Auto-detection of new projects from extraction. Registry persistence fix (ATOCORE_PROJECT_REGISTRY_DIR env var). abb-space/p08 aliases added, atomizer-v2 ingested (568 docs, +12,472 vectors). Identity/preference seed (6 new), signal-aggressive extractor rewrite (llm-0.4.0), auto vault refresh in cron. **OpenClaw one-way pull importer** built per codex proposal — reads /home/papa/clawd SOUL.md, USER.md, MEMORY.md, MODEL-ROUTING.md, memory/*.md via SSH, hash-delta import, pipeline triages. First import: 10 candidates → 10 promoted with lenient triage rule. Active memories 47→84. State entries 61→78. Tests 290→297. Dashboard at /admin/dashboard. Wiki at /wiki.
- **2026-04-12 Claude** `4f8bec7..4ac4e5c` Session close. Merged OpenClaw capture plugin, ingested atomizer-v2 (568 docs, 12,472 new vectors → 33,253 total), seeded Phase 4 identity/preference memories (6 new, 47 total active), added deeper Wave 2 state entries (p05 +3, p06 +3), fixed R9 project trust hierarchy (7 case tests), built auto-triage pipeline, observability dashboard at /admin/dashboard. Updated master-plan-status.md and DEV-LEDGER.md to reflect full current state. 7/14 phases baseline complete. All P1s closed. Nightly pipeline runs unattended with both Claude Code and OpenClaw feeding the reflection loop.
- **2026-04-12 Codex (branch `codex/openclaw-capture-plugin`)** added a minimal external OpenClaw plugin at `openclaw-plugins/atocore-capture/` that mirrors Claude Code capture semantics: user-triggered assistant turns are POSTed to AtoCore `/interactions` with `client="openclaw"` and `reinforce=true`, fail-open, no extraction in-path. For live verification, temporarily added the local plugin load path to OpenClaw config and restarted the gateway so the plugin can load. Branch truth is ready; end-to-end verification still needs one fresh post-restart OpenClaw user turn to confirm new `client=openclaw` interactions appear on Dalidou.
- **2026-04-12 Claude** Batch 3 (R9 fix): `144dbbd..e5e9a99`. Trust hierarchy for project attribution — interaction scope always wins when set, model project only used for unscoped interactions + registered check. 7 case tests (A-G) cover every combination. Harness 17/18 (no regression). Tests 286->290. Before: wrong registered project could silently override interaction scope. After: interaction.project is the strongest signal; model project is only a fallback for unscoped captures. Not yet guaranteed: nothing prevents the *same* project's model output from being semantically wrong within that project. R9 marked fixed.
@@ -201,4 +220,9 @@ git push origin main && ssh papa@dalidou "bash /srv/storage/atocore/app/deploy/d
python scripts/atocore_client.py batch-extract '' '' 200 false # preview
python scripts/atocore_client.py batch-extract '' '' 200 true # persist
python scripts/atocore_client.py triage
# Reproduce the ledger's test_count claim from a clean checkout
pip install -r requirements-dev.txt
pytest --collect-only -q | tail -1 # -> "N tests collected"
pytest -q # -> "N passed"
```

View File

@@ -38,7 +38,7 @@
},
{
"id": "p06-polisher",
"aliases": ["p06", "polisher"],
"aliases": ["p06", "polisher", "p11", "polisher-fullum", "P11-Polisher-Fullum"],
"description": "Active P06 polisher corpus from PKM, software-suite notes, and selected repo context.",
"ingest_roots": [
{
@@ -47,6 +47,30 @@
"label": "P06 staged project docs"
}
]
},
{
"id": "abb-space",
"aliases": ["abb", "abb-mirror", "p08", "p08-abb-space", "p08-abb-space-mirror"],
"description": "ABB Space mirror - lead/proposition for Atomaste. Also tracked as P08.",
"ingest_roots": [
{
"source": "vault",
"subpath": "incoming/projects/abb-space",
"label": "ABB Space docs"
}
]
},
{
"id": "atomizer-v2",
"aliases": ["atomizer", "aom", "aom-v2"],
"description": "Atomizer V2 parametric optimization platform",
"ingest_roots": [
{
"source": "vault",
"subpath": "incoming/projects/atomizer-v2/repo",
"label": "Atomizer V2 repo"
}
]
}
]
}

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@@ -34,22 +34,36 @@ export PYTHONPATH="$APP_DIR/src:${PYTHONPATH:-}"
log "=== AtoCore batch extraction + triage starting ==="
log "URL=$ATOCORE_URL LIMIT=$LIMIT"
# --- Pipeline stats accumulator ---
EXTRACT_OUT=""
TRIAGE_OUT=""
HARNESS_OUT=""
# Step A: Extract candidates from recent interactions
log "Step A: LLM extraction"
python3 "$APP_DIR/scripts/batch_llm_extract_live.py" \
EXTRACT_OUT=$(python3 "$APP_DIR/scripts/batch_llm_extract_live.py" \
--base-url "$ATOCORE_URL" \
--limit "$LIMIT" \
2>&1 || {
2>&1) || {
log "WARN: batch extraction failed (non-blocking)"
}
echo "$EXTRACT_OUT"
# Step B: Auto-triage candidates in the queue
log "Step B: auto-triage"
python3 "$APP_DIR/scripts/auto_triage.py" \
TRIAGE_OUT=$(python3 "$APP_DIR/scripts/auto_triage.py" \
--base-url "$ATOCORE_URL" \
2>&1 || {
2>&1) || {
log "WARN: auto-triage failed (non-blocking)"
}
echo "$TRIAGE_OUT"
# Step B2: Auto-promote reinforced candidates + expire stale ones
log "Step B2: auto-promote + expire"
python3 "$APP_DIR/scripts/auto_promote_reinforced.py" \
2>&1 || {
log "WARN: auto-promote/expire failed (non-blocking)"
}
# Step C: Weekly synthesis (Sundays only)
if [[ "$(date -u +%u)" == "7" ]]; then
@@ -66,4 +80,73 @@ if [[ "$(date -u +%u)" == "7" ]]; then
2>&1 || true
fi
# Step E: Retrieval harness (daily)
log "Step E: retrieval harness"
HARNESS_OUT=$(python3 "$APP_DIR/scripts/retrieval_eval.py" \
--json \
--base-url "$ATOCORE_URL" \
2>&1) || {
log "WARN: retrieval harness failed (non-blocking)"
}
echo "$HARNESS_OUT"
# Step F: Persist pipeline summary to project state
log "Step F: pipeline summary"
python3 -c "
import json, urllib.request, re, sys
base = '$ATOCORE_URL'
ts = '$TIMESTAMP'
def post_state(key, value):
body = json.dumps({
'project': 'atocore', 'category': 'status',
'key': key, 'value': value, 'source': 'nightly pipeline',
}).encode()
req = urllib.request.Request(
f'{base}/project/state', data=body,
headers={'Content-Type': 'application/json'}, method='POST',
)
try:
urllib.request.urlopen(req, timeout=10)
except Exception as e:
print(f'WARN: failed to persist {key}: {e}', file=sys.stderr)
# Parse harness JSON
harness = {}
try:
harness = json.loads('''$HARNESS_OUT''')
post_state('retrieval_harness_result', json.dumps({
'passed': harness.get('passed', 0),
'total': harness.get('total', 0),
'failures': [f['name'] for f in harness.get('fixtures', []) if not f.get('ok')],
'run_at': ts,
}))
p, t = harness.get('passed', '?'), harness.get('total', '?')
print(f'Harness: {p}/{t}')
except Exception:
print('WARN: could not parse harness output')
# Parse triage counts from stdout
triage_out = '''$TRIAGE_OUT'''
promoted = len(re.findall(r'promoted', triage_out, re.IGNORECASE))
rejected = len(re.findall(r'rejected', triage_out, re.IGNORECASE))
needs_human = len(re.findall(r'needs.human', triage_out, re.IGNORECASE))
# Build summary
summary = {
'run_at': ts,
'harness_passed': harness.get('passed', -1),
'harness_total': harness.get('total', -1),
'triage_promoted': promoted,
'triage_rejected': rejected,
'triage_needs_human': needs_human,
}
post_state('pipeline_last_run', ts)
post_state('pipeline_summary', json.dumps(summary))
print(f'Pipeline summary persisted: {json.dumps(summary)}')
" 2>&1 || {
log "WARN: pipeline summary persistence failed (non-blocking)"
}
log "=== AtoCore batch extraction + triage complete ==="

View File

@@ -166,10 +166,19 @@ def _extract_last_user_prompt(transcript_path: str) -> str:
# Project inference from working directory.
# Maps known repo paths to AtoCore project IDs. The user can extend
# this table or replace it with a registry lookup later.
_VAULT = "C:\\Users\\antoi\\antoine\\My Libraries\\Antoine Brain Extension"
_PROJECT_PATH_MAP: dict[str, str] = {
# Add mappings as needed, e.g.:
# "C:\\Users\\antoi\\gigabit": "p04-gigabit",
# "C:\\Users\\antoi\\interferometer": "p05-interferometer",
f"{_VAULT}\\2-Projects\\P04-GigaBIT-M1": "p04-gigabit",
f"{_VAULT}\\2-Projects\\P10-Interferometer": "p05-interferometer",
f"{_VAULT}\\2-Projects\\P11-Polisher-Fullum": "p06-polisher",
f"{_VAULT}\\2-Projects\\P08-ABB-Space-Mirror": "abb-space",
f"{_VAULT}\\2-Projects\\I01-Atomizer": "atomizer-v2",
f"{_VAULT}\\2-Projects\\I02-AtoCore": "atocore",
"C:\\Users\\antoi\\ATOCore": "atocore",
"C:\\Users\\antoi\\Polisher-Sim": "p06-polisher",
"C:\\Users\\antoi\\Fullum-Interferometer": "p05-interferometer",
"C:\\Users\\antoi\\Atomizer-V2": "atomizer-v2",
}

View File

@@ -33,15 +33,21 @@ read-only additive mode.
at 5% budget ratio. Future identity/preference extraction happens
organically via the nightly LLM extraction pipeline.
- Phase 8 - OpenClaw Integration. As of 2026-04-12 the T420 OpenClaw
helper (`t420-openclaw/atocore.py`) is verified end-to-end against
live Dalidou: health check, auto-context with project detection,
Trusted Project State surfacing, project-memory band, fail-open on
unreachable host. Tested from both the development machine and the
T420 via SSH. The helper covers 15 of the 33 API endpoints — the
excluded endpoints (memory management, interactions, backup) are
correctly scoped to the operator client (`scripts/atocore_client.py`)
per the read-only additive integration model.
- Phase 8 - OpenClaw Integration (baseline only, not primary surface).
As of 2026-04-15 the T420 OpenClaw helper (`t420-openclaw/atocore.py`)
is verified end-to-end against live Dalidou: health check, auto-context
with project detection, Trusted Project State surfacing, project-memory
band, fail-open on unreachable host. Tested from both the development
machine and the T420 via SSH. Scope is narrow: **14 request shapes
against ~44 server routes**, predominantly read-oriented plus
`POST/DELETE /project/state` and `POST /ingest/sources`. Memory
management, interactions capture (covered separately by the OpenClaw
capture plugin), admin/backup, entities, triage, and extraction write
paths remain out of this client's surface by design — they are scoped
to the operator client (`scripts/atocore_client.py`) per the
read-heavy additive integration model. "Primary integration" is
therefore overclaim; "baseline read + project-state write helper" is
the accurate framing.
### Baseline Complete
@@ -120,25 +126,29 @@ This sits implicitly between Phase 8 (OpenClaw) and Phase 11
(multi-model). Memory-review and engineering-entity commands are
deferred from the shared client until their workflows are exercised.
## What Is Real Today (updated 2026-04-12)
## What Is Real Today (updated 2026-04-16)
- canonical AtoCore runtime on Dalidou (build_sha tracked, deploy.sh verified)
- 33,253 vectors across 5 registered projects
- project registry with template, proposal, register, update, refresh
- 5 registered projects:
- `p04-gigabit` (483 docs, 5 state entries)
- `p05-interferometer` (109 docs, 9 state entries)
- `p06-polisher` (564 docs, 9 state entries)
- `atomizer-v2` (568 docs, newly ingested 2026-04-12)
- `atocore` (drive source, 38 state entries)
- 47 active memories (16 project, 16 knowledge, 6 adaptation, 3 identity, 3 preference, 3 episodic)
- canonical AtoCore runtime on Dalidou (`775960c`, deploy.sh verified)
- 33,253 vectors across 6 registered projects
- 234 captured interactions (192 claude-code, 38 openclaw, 4 test)
- 6 registered projects:
- `p04-gigabit` (483 docs, 15 state entries)
- `p05-interferometer` (109 docs, 18 state entries)
- `p06-polisher` (564 docs, 19 state entries)
- `atomizer-v2` (568 docs, 5 state entries)
- `abb-space` (6 state entries)
- `atocore` (drive source, 47 state entries)
- 110 Trusted Project State entries across all projects (decisions, requirements, facts, contacts, milestones)
- 84 active memories (31 project, 23 knowledge, 10 episodic, 8 adaptation, 7 preference, 5 identity)
- context pack assembly with 4 tiers: Trusted Project State > identity/preference > project memories > retrieved chunks
- query-relevance memory ranking with overlap-density scoring
- retrieval eval harness: 18 fixtures, 17/18 passing
- 290 tests passing
- nightly pipeline: backup → cleanup → rsync → LLM extraction (sonnet) → auto-triage
- retrieval eval harness: 18 fixtures, 17/18 passing on live
- 303 tests passing
- nightly pipeline: backup → cleanup → rsync → OpenClaw import → vault refresh → extract → triage → **auto-promote/expire** → weekly synth/lint → **retrieval harness****pipeline summary to project state**
- Phase 10 operational: reinforcement-based auto-promotion (ref_count ≥ 3, confidence ≥ 0.7) + stale candidate expiry (14 days unreinforced)
- pipeline health visible in dashboard: interaction totals by client, pipeline last_run, harness results, triage stats
- off-host backup to clawdbot (T420) via rsync
- both Claude Code and OpenClaw capture interactions to AtoCore
- both Claude Code and OpenClaw capture interactions to AtoCore (OpenClaw via `before_agent_start` + `llm_output` plugin, verified live)
- DEV-LEDGER.md as shared operating memory between Claude and Codex
- observability dashboard at GET /admin/dashboard
@@ -146,26 +156,28 @@ deferred from the shared client until their workflows are exercised.
These are the current practical priorities.
1. **Observe and stabilize** — let the nightly pipeline run for a week,
check the dashboard daily, verify memories accumulate correctly
from organic Claude Code and OpenClaw use
2. **Multi-model triage** (Phase 11 entry) — switch auto-triage to a
1. **Observe the enhanced pipeline** — let the nightly pipeline run for a
week with the new harness + summary + auto-promote steps. Check the
dashboard daily. Verify pipeline summary populates correctly.
2. **Knowledge density** — run batch extraction over the full 234
interactions (`--since 2026-01-01`) to mine the backlog for knowledge.
Target: 100+ active memories.
3. **Multi-model triage** (Phase 11 entry) — switch auto-triage to a
different model than the extractor for independent validation
3. **Automated eval in cron** (Phase 12 entry) — add retrieval harness
to the nightly cron so regressions are caught automatically
4. **Atomizer-v2 state entries** — curate Trusted Project State for the
newly ingested Atomizer knowledge base
4. **Fix p04-constraints harness failure** — retrieval doesn't surface
"Zerodur" for p04 constraint queries. Investigate if it's a missing
memory or retrieval ranking issue.
## Next
These are the next major layers after the current stabilization pass.
1. Phase 10 Write-back — confidence-based auto-promotion from
reinforcement signal (a memory reinforced N times auto-promotes)
2. Phase 6 AtoDrive — clarify Google Drive as a trusted operational
1. Phase 6 AtoDrive — clarify Google Drive as a trusted operational
source and ingest from it
3. Phase 13 Hardening — Chroma backup policy, monitoring, alerting,
2. Phase 13 Hardening — Chroma backup policy, monitoring, alerting,
failure visibility beyond log files
3. Engineering V1 implementation sprint — once knowledge density is
sufficient and the pipeline feels boring and dependable
## Later
@@ -187,9 +199,10 @@ These remain intentionally deferred.
plugin now exists (`openclaw-plugins/atocore-capture/`), interactions
flow. Write-back of promoted memories back to OpenClaw's own memory
system is still deferred.
- ~~automatic memory promotion~~ — auto-triage now handles promote/reject
for extraction candidates. Reinforcement-based auto-promotion
(Phase 10) is the remaining piece.
- ~~automatic memory promotion~~ — Phase 10 complete: auto-triage handles
extraction candidates, reinforcement-based auto-promotion graduates
candidates referenced 3+ times to active, stale candidates expire
after 14 days unreinforced.
- ~~reflection loop integration~~ — fully operational: capture (both
clients) → reinforce (automatic) → extract (nightly cron, sonnet) →
auto-triage (nightly, sonnet) → only needs_human reaches the user.

View File

@@ -0,0 +1,63 @@
/**
* AtoCore capture hook for OpenClaw.
*
* Listens on message:received (buffer prompt) and message:sent (POST pair).
* Fail-open: errors are caught silently.
*/
const BASE_URL = process.env.ATOCORE_BASE_URL || "http://dalidou:8100";
const MIN_LEN = 15;
const MAX_RESP = 50000;
let lastPrompt = null; // simple single-slot buffer
const atocoreCaptureHook = async (event) => {
try {
if (process.env.ATOCORE_CAPTURE_DISABLED === "1") return;
if (event.type === "message" && event.action === "received") {
const content = (event.context?.content || "").trim();
if (content.length >= MIN_LEN && !content.startsWith("<")) {
lastPrompt = { text: content, ts: Date.now() };
}
return;
}
if (event.type === "message" && event.action === "sent") {
if (!event.context?.success) return;
const response = (event.context?.content || "").trim();
if (!response || !lastPrompt) return;
// Discard stale prompts (>5 min old)
if (Date.now() - lastPrompt.ts > 300000) {
lastPrompt = null;
return;
}
const prompt = lastPrompt.text;
lastPrompt = null;
const body = JSON.stringify({
prompt,
response: response.length > MAX_RESP
? response.slice(0, MAX_RESP) + "\n\n[truncated]"
: response,
client: "openclaw",
session_id: event.sessionKey || "",
project: "",
reinforce: true,
});
fetch(BASE_URL.replace(/\/$/, "") + "/interactions", {
method: "POST",
headers: { "Content-Type": "application/json" },
body,
signal: AbortSignal.timeout(10000),
}).catch(() => {});
}
} catch {
// fail-open: never crash the gateway
}
};
export default atocoreCaptureHook;

View File

@@ -0,0 +1,79 @@
#!/usr/bin/env python3
"""Auto-promote reinforced candidates + expire stale ones.
Phase 10: reinforcement-based auto-promotion. Candidates referenced
by 3+ interactions with confidence >= 0.7 graduate to active.
Candidates unreinforced for 14+ days are auto-rejected.
Usage:
python3 scripts/auto_promote_reinforced.py [--base-url URL] [--dry-run]
"""
from __future__ import annotations
import argparse
import json
import os
import sys
# Allow importing from src/ when run from repo root
sys.path.insert(0, os.path.join(os.path.dirname(__file__), "..", "src"))
from atocore.memory.service import auto_promote_reinforced, expire_stale_candidates
def main() -> None:
parser = argparse.ArgumentParser(description="Auto-promote + expire candidates")
parser.add_argument("--dry-run", action="store_true", help="Report only, don't change anything")
parser.add_argument("--min-refs", type=int, default=3, help="Min reference_count for promotion")
parser.add_argument("--min-confidence", type=float, default=0.7, help="Min confidence for promotion")
parser.add_argument("--expire-days", type=int, default=14, help="Days before unreinforced candidates expire")
args = parser.parse_args()
if args.dry_run:
print("DRY RUN — no changes will be made")
# For dry-run, query directly and report
from atocore.models.database import get_connection
from datetime import datetime, timedelta, timezone
cutoff_promote = (datetime.now(timezone.utc) - timedelta(days=args.expire_days)).strftime("%Y-%m-%d %H:%M:%S")
cutoff_expire = cutoff_promote
with get_connection() as conn:
promotable = conn.execute(
"SELECT id, content, memory_type, project, confidence, reference_count "
"FROM memories WHERE status = 'candidate' "
"AND COALESCE(reference_count, 0) >= ? AND confidence >= ? "
"AND last_referenced_at >= ?",
(args.min_refs, args.min_confidence, cutoff_promote),
).fetchall()
expirable = conn.execute(
"SELECT id, content, memory_type, project "
"FROM memories WHERE status = 'candidate' "
"AND COALESCE(reference_count, 0) = 0 AND created_at < ?",
(cutoff_expire,),
).fetchall()
print(f"\nWould promote {len(promotable)} candidates:")
for r in promotable:
print(f" [{r['memory_type']}] refs={r['reference_count']} conf={r['confidence']:.2f} | {r['content'][:80]}...")
print(f"\nWould expire {len(expirable)} stale candidates:")
for r in expirable:
print(f" [{r['memory_type']}] {r['project'] or 'global'} | {r['content'][:80]}...")
return
promoted = auto_promote_reinforced(
min_reference_count=args.min_refs,
min_confidence=args.min_confidence,
)
expired = expire_stale_candidates(max_age_days=args.expire_days)
print(f"promoted={len(promoted)} expired={len(expired)}")
if promoted:
print(f"Promoted IDs: {promoted}")
if expired:
print(f"Expired IDs: {expired}")
if __name__ == "__main__":
main()

View File

@@ -63,9 +63,11 @@ Rules:
3. CONTRADICTS when the candidate *conflicts* with an existing active memory (not a duplicate, but states something that can't both be true). Set `conflicts_with` to the existing memory id. This flags the tension for human review instead of silently rejecting or double-storing. Examples: "Option A selected" vs "Option B selected" for the same decision; "uses material X" vs "uses material Y" for the same component.
4. NEEDS_HUMAN when you're genuinely unsure — the candidate might be valuable but you can't tell without domain knowledge. This should be rare (< 20% of candidates).
4. OPENCLAW-CURATED content (candidate content starts with "From OpenClaw/"): apply a MUCH LOWER bar. OpenClaw's SOUL.md, USER.md, MEMORY.md, MODEL-ROUTING.md, and dated memory/*.md files are ALREADY curated by OpenClaw as canonical continuity. Promote unless clearly wrong or a genuine duplicate. Do NOT reject OpenClaw content as "process rule belongs elsewhere" or "session log" — that's exactly what AtoCore wants to absorb. Session events, project updates, stakeholder notes, and decisions from OpenClaw daily memory files ARE valuable context and should promote.
5. Output ONLY the JSON object. No prose, no markdown, no explanation outside the reason field."""
5. NEEDS_HUMAN when you're genuinely unsure — the candidate might be valuable but you can't tell without domain knowledge. This should be rare (< 20% of candidates).
6. Output ONLY the JSON object. No prose, no markdown, no explanation outside the reason field."""
_sandbox_cwd = None

View File

@@ -1,12 +1,15 @@
"""Host-side LLM batch extraction — pure HTTP client, no atocore imports.
"""Host-side LLM batch extraction — HTTP client + shared prompt module.
Fetches interactions from the AtoCore API, runs ``claude -p`` locally
for each, and POSTs candidates back. Zero dependency on atocore source
or Python packages — only uses stdlib + the ``claude`` CLI on PATH.
for each, and POSTs candidates back. Uses stdlib + the ``claude`` CLI
on PATH, plus the stdlib-only shared prompt/parser module at
``atocore.memory._llm_prompt`` to eliminate prompt/parser drift
against the in-container extractor (R12).
This is necessary because the ``claude`` CLI is on the Dalidou HOST
but not inside the Docker container, and the host's Python doesn't
have the container's dependencies (pydantic_settings, etc.).
have the container's dependencies (pydantic_settings, etc.) — so we
only import the one stdlib-only module, not the full atocore package.
"""
from __future__ import annotations
@@ -23,88 +26,26 @@ import urllib.parse
import urllib.request
from datetime import datetime, timezone
# R12: share the prompt + parser with the in-container extractor so
# the two paths can't drift. The imported module is stdlib-only by
# design; see src/atocore/memory/_llm_prompt.py.
_SCRIPT_DIR = os.path.dirname(os.path.abspath(__file__))
_SRC_DIR = os.path.abspath(os.path.join(_SCRIPT_DIR, "..", "src"))
if _SRC_DIR not in sys.path:
sys.path.insert(0, _SRC_DIR)
from atocore.memory._llm_prompt import ( # noqa: E402
MEMORY_TYPES,
SYSTEM_PROMPT,
build_user_message,
normalize_candidate_item,
parse_llm_json_array,
)
DEFAULT_BASE_URL = os.environ.get("ATOCORE_BASE_URL", "http://localhost:8100")
DEFAULT_MODEL = os.environ.get("ATOCORE_LLM_EXTRACTOR_MODEL", "sonnet")
DEFAULT_TIMEOUT_S = float(os.environ.get("ATOCORE_LLM_EXTRACTOR_TIMEOUT_S", "90"))
MAX_RESPONSE_CHARS = 8000
MAX_PROMPT_CHARS = 2000
MEMORY_TYPES = {"identity", "preference", "project", "episodic", "knowledge", "adaptation"}
SYSTEM_PROMPT = """You extract memory candidates from LLM conversation turns for a personal context engine called AtoCore.
AtoCore is the brain for Atomaste's engineering work. Known projects:
p04-gigabit, p05-interferometer, p06-polisher, atomizer-v2, atocore,
abb-space. Unknown project names — still tag them, the system auto-detects.
Your job is to emit SIGNALS that matter for future context. Be aggressive:
err on the side of capturing useful signal. Triage filters noise downstream.
WHAT TO EMIT (in order of importance):
1. PROJECT ACTIVITY — any mention of a project with context worth remembering:
- "Schott quote received for ABB-Space" (event + project)
- "Cédric asked about p06 firmware timing" (stakeholder event)
- "Still waiting on Zygo lead-time from Nabeel" (blocker status)
- "p05 vendor decision needs to happen this week" (action item)
2. DECISIONS AND CHOICES — anything that commits to a direction:
- "Going with Zygo Verifire SV for p05" (decision)
- "Dropping stitching from primary workflow" (design choice)
- "USB SSD mandatory, not SD card" (architectural commitment)
3. DURABLE ENGINEERING INSIGHT — earned knowledge that generalizes:
- "CTE gradient dominates WFE at F/1.2" (materials insight)
- "Preston model breaks below 5N because contact assumption fails"
- "m=1 coma NOT correctable by force modulation" (controls insight)
Test: would a competent engineer NEED experience to know this?
If it's textbook/google-findable, skip it.
4. STAKEHOLDER AND VENDOR EVENTS:
- "Email sent to Nabeel 2026-04-13 asking for lead time"
- "Meeting with Jason on Table 7 next Tuesday"
- "Starspec wants updated CAD by Friday"
5. PREFERENCES AND ADAPTATIONS that shape how Antoine works:
- "Antoine prefers OAuth over API keys"
- "Extraction stays off the capture hot path"
WHAT TO SKIP:
- Pure conversational filler ("ok thanks", "let me check")
- Instructional help content ("run this command", "here's how to...")
- Obvious textbook facts anyone can google in 30 seconds
- Session meta-chatter ("let me commit this", "deploy running")
- Transient system state snapshots ("36 active memories right now")
CANDIDATE TYPES — choose the best fit:
- project — a fact, decision, or event specific to one named project
- knowledge — durable engineering insight (use domain, not project)
- preference — how Antoine works / wants things done
- adaptation — a standing rule or adjustment to behavior
- episodic — a stakeholder event or milestone worth remembering
DOMAINS for knowledge candidates (required when type=knowledge and project is empty):
physics, materials, optics, mechanics, manufacturing, metrology,
controls, software, math, finance, business
TRUST HIERARCHY:
- project-specific: set project to the project id, leave domain empty
- domain knowledge: set domain, leave project empty
- events/activity: use project, type=project or episodic
- one conversation can produce MULTIPLE candidates — emit them all
OUTPUT RULES:
- Each candidate content under 250 characters, stands alone
- Default confidence 0.5. Raise to 0.7 only for ratified/committed claims.
- Raw JSON array, no prose, no markdown fences
- Empty array [] is fine when the conversation has no durable signal
Each element:
{"type": "project|knowledge|preference|adaptation|episodic", "content": "...", "project": "...", "domain": "", "confidence": 0.5}"""
_sandbox_cwd = None
@@ -175,14 +116,7 @@ def extract_one(prompt, response, project, model, timeout_s):
if not shutil.which("claude"):
return [], "claude_cli_missing"
prompt_excerpt = prompt[:MAX_PROMPT_CHARS]
response_excerpt = response[:MAX_RESPONSE_CHARS]
user_message = (
f"PROJECT HINT (may be empty): {project}\n\n"
f"USER PROMPT:\n{prompt_excerpt}\n\n"
f"ASSISTANT RESPONSE:\n{response_excerpt}\n\n"
"Return the JSON array now."
)
user_message = build_user_message(prompt, response, project)
args = [
"claude", "-p",
@@ -211,66 +145,25 @@ def extract_one(prompt, response, project, model, timeout_s):
def parse_candidates(raw, interaction_project):
"""Parse model JSON output into candidate dicts."""
text = raw.strip()
if text.startswith("```"):
text = text.strip("`")
nl = text.find("\n")
if nl >= 0:
text = text[nl + 1:]
if text.endswith("```"):
text = text[:-3]
text = text.strip()
if not text or text == "[]":
return []
if not text.lstrip().startswith("["):
start = text.find("[")
end = text.rfind("]")
if start >= 0 and end > start:
text = text[start:end + 1]
try:
parsed = json.loads(text)
except json.JSONDecodeError:
return []
if not isinstance(parsed, list):
return []
"""Parse model JSON output into candidate dicts.
Stripping + per-item normalization come from the shared
``_llm_prompt`` module. Host-side project attribution: interaction
scope wins, otherwise keep the model's tag (the API's own R9
registry-check will happen server-side in the container on write;
here we preserve the signal instead of dropping it).
"""
results = []
for item in parsed:
if not isinstance(item, dict):
for item in parse_llm_json_array(raw):
normalized = normalize_candidate_item(item)
if normalized is None:
continue
mem_type = str(item.get("type") or "").strip().lower()
content = str(item.get("content") or "").strip()
model_project = str(item.get("project") or "").strip()
domain = str(item.get("domain") or "").strip().lower()
# R9 trust hierarchy: interaction scope always wins when set.
# For unscoped interactions, keep model's project tag even if
# unregistered — the system will detect new projects/leads.
if interaction_project:
project = interaction_project
elif model_project:
project = model_project
else:
project = ""
# Domain knowledge: embed tag in content for cross-project retrieval
if domain and not project:
content = f"[{domain}] {content}"
conf = item.get("confidence", 0.5)
if mem_type not in MEMORY_TYPES or not content:
continue
try:
conf = max(0.0, min(1.0, float(conf)))
except (TypeError, ValueError):
conf = 0.5
project = interaction_project or normalized["project"] or ""
results.append({
"memory_type": mem_type,
"content": content[:1000],
"memory_type": normalized["type"],
"content": normalized["content"],
"project": project,
"confidence": conf,
"confidence": normalized["confidence"],
})
return results

View File

@@ -42,7 +42,7 @@ from pathlib import Path
DEFAULT_BASE_URL = os.environ.get("ATOCORE_BASE_URL", "http://localhost:8100")
DEFAULT_OPENCLAW_HOST = os.environ.get("ATOCORE_OPENCLAW_HOST", "papa@192.168.86.39")
DEFAULT_OPENCLAW_PATH = os.environ.get("ATOCORE_OPENCLAW_PATH", "/home/papa/openclaw-workspace")
DEFAULT_OPENCLAW_PATH = os.environ.get("ATOCORE_OPENCLAW_PATH", "/home/papa/clawd")
# Files to pull and how to classify them
DURABLE_FILES = [

View File

@@ -218,8 +218,8 @@
"Tailscale"
],
"expect_absent": [
"GigaBIT"
"[Source: p04-gigabit/"
],
"notes": "New p06 memory: Tailscale mesh for RPi remote access"
"notes": "New p06 memory: Tailscale mesh for RPi remote access. Cross-project guard is a source-path check, not a word blacklist: the polisher ARCHITECTURE.md legitimately mentions the GigaBIT M1 mirror (it is what the polisher is built for), so testing for absence of that word produces false positives. The real invariant is that no p04 source chunks are retrieved into p06 context."
}
]

View File

@@ -0,0 +1,159 @@
#!/usr/bin/env python3
"""Seed Trusted Project State entries for all active projects.
Populates the project_state table with curated decisions, requirements,
facts, contacts, and milestones so context packs have real content
in the highest-trust tier.
Usage:
python3 scripts/seed_project_state.py --base-url http://dalidou:8100
python3 scripts/seed_project_state.py --base-url http://dalidou:8100 --dry-run
"""
from __future__ import annotations
import argparse
import json
import urllib.request
import sys
# Each entry: (project, category, key, value, source)
SEED_ENTRIES: list[tuple[str, str, str, str, str]] = [
# ---- p04-gigabit (GigaBIT M1 1.2m Primary Mirror) ----
("p04-gigabit", "fact", "mirror-spec",
"1.2m borosilicate primary mirror for GigaBIT telescope. F/1.5, lightweight isogrid back structure.",
"CDR docs + vault"),
("p04-gigabit", "decision", "back-structure",
"Option B selected: conical isogrid back structure with variable rib density. Chosen over flat-back for stiffness-to-weight ratio.",
"CDR 2026-01"),
("p04-gigabit", "decision", "polishing-vendor",
"ABB Space (formerly INO) selected as polishing vendor. Contract includes computer-controlled polishing (CCP) and ion beam figuring (IBF).",
"Entente de service 2026-01"),
("p04-gigabit", "requirement", "surface-quality",
"Surface figure accuracy: < 25nm RMS after final figuring. Microroughness: < 2nm RMS.",
"CDR requirements"),
("p04-gigabit", "contact", "abb-space",
"ABB Space (INO), Quebec City. Primary contact for mirror polishing, CCP, and IBF. Project lead: coordinating FDR deliverables.",
"vendor records"),
("p04-gigabit", "milestone", "fdr",
"Final Design Review (FDR) in preparation. Deliverables include interface drawings, thermal analysis, and updated error budget.",
"project timeline"),
# ---- p05-interferometer (Fullum Interferometer) ----
("p05-interferometer", "fact", "system-overview",
"Custom Fizeau interferometer for in-situ metrology of large optics. Designed for the Fullum observatory polishing facility.",
"vault docs"),
("p05-interferometer", "decision", "cgh-design",
"Computer-generated hologram (CGH) selected for null testing of the 1.2m mirror. Vendor: Diffraction International.",
"vendor correspondence"),
("p05-interferometer", "requirement", "measurement-accuracy",
"Measurement accuracy target: lambda/20 (< 30nm PV) for surface figure verification.",
"system requirements"),
("p05-interferometer", "fact", "laser-source",
"HeNe laser source at 632.8nm. Beam expansion to cover full 1.2m aperture via diverger + CGH.",
"optical design docs"),
("p05-interferometer", "contact", "diffraction-intl",
"Diffraction International: CGH vendor. Fabricates the computer-generated hologram for null testing.",
"vendor records"),
# ---- p06-polisher (Polisher Suite / P11-Polisher-Fullum) ----
("p06-polisher", "fact", "suite-overview",
"Integrated CNC polishing suite for the Fullum observatory. Includes 3-axis polishing machine, metrology integration, and real-time process control.",
"vault docs"),
("p06-polisher", "decision", "control-architecture",
"Beckhoff TwinCAT 3 selected for real-time motion control. EtherCAT fieldbus for servo drives and I/O.",
"architecture docs"),
("p06-polisher", "decision", "firmware-split",
"Firmware split into safety layer (PLC-level interlocks) and application layer (trajectory generation, adaptive dwell-time).",
"architecture docs"),
("p06-polisher", "requirement", "axis-travel",
"Z-axis: 200mm travel for tool engagement. X/Y: covers 1.2m mirror diameter plus overshoot margin.",
"mechanical requirements"),
("p06-polisher", "fact", "telemetry",
"Real-time telemetry via MQTT. Metrics: spindle RPM, force sensor, temperature probes, position feedback at 1kHz.",
"control design docs"),
("p06-polisher", "contact", "fullum-observatory",
"Fullum Observatory: site where the polishing suite will be installed. Provides infrastructure (power, vibration isolation, clean environment).",
"project records"),
# ---- atomizer-v2 ----
("atomizer-v2", "fact", "product-overview",
"Atomizer V2: internal project management and multi-agent orchestration platform. War-room based task coordination.",
"repo docs"),
("atomizer-v2", "decision", "projects-first-architecture",
"Migration to projects-first architecture: each project is a workspace with its own agents, tasks, and knowledge.",
"war-room-migration-plan-v2.md"),
# ---- abb-space (P08) ----
("abb-space", "fact", "contract-overview",
"ABB Space mirror polishing contract. Phase 1: spherical mirror polishing (200mm). Schott Zerodur substrate.",
"quotes + correspondence"),
("abb-space", "contact", "schott",
"Schott AG: substrate supplier for Zerodur mirror blanks. Quote received for 200mm blank.",
"vendor records"),
# ---- atocore ----
("atocore", "fact", "architecture",
"AtoCore: runtime memory and knowledge layer. FastAPI + SQLite + ChromaDB. Hosted on Dalidou (Docker). Nightly pipeline: backup, extract, triage, synthesis.",
"codebase"),
("atocore", "decision", "no-api-keys",
"No API keys allowed in AtoCore. LLM-assisted features use OAuth via 'claude -p' CLI or equivalent CLI-authenticated paths.",
"DEV-LEDGER 2026-04-12"),
("atocore", "decision", "storage-separation",
"Human-readable sources (vault, drive) and machine operational storage (SQLite, ChromaDB) must remain separate. Machine DB is derived state.",
"AGENTS.md"),
("atocore", "decision", "extraction-off-hot-path",
"Extraction stays off the capture hot path. Batch/manual only. Never block interaction recording with extraction.",
"DEV-LEDGER 2026-04-11"),
]
def main() -> None:
parser = argparse.ArgumentParser(description="Seed Trusted Project State")
parser.add_argument("--base-url", default="http://dalidou:8100")
parser.add_argument("--dry-run", action="store_true")
args = parser.parse_args()
base = args.base_url.rstrip("/")
created = 0
skipped = 0
errors = 0
for project, category, key, value, source in SEED_ENTRIES:
if args.dry_run:
print(f" [DRY] {project}/{category}/{key}: {value[:60]}...")
created += 1
continue
body = json.dumps({
"project": project,
"category": category,
"key": key,
"value": value,
"source": source,
"confidence": 1.0,
}).encode()
req = urllib.request.Request(
f"{base}/project/state",
data=body,
headers={"Content-Type": "application/json"},
method="POST",
)
try:
resp = urllib.request.urlopen(req, timeout=10)
result = json.loads(resp.read())
if result.get("created"):
created += 1
print(f" + {project}/{category}/{key}")
else:
skipped += 1
print(f" = {project}/{category}/{key} (already exists)")
except Exception as e:
errors += 1
print(f" ! {project}/{category}/{key}: {e}", file=sys.stderr)
print(f"\nDone: {created} created, {skipped} skipped, {errors} errors")
if __name__ == "__main__":
main()

View File

@@ -55,6 +55,7 @@ from atocore.memory.extractor import (
)
from atocore.memory.extractor_llm import (
LLM_EXTRACTOR_VERSION,
_cli_available as _llm_cli_available,
extract_candidates_llm,
)
from atocore.memory.reinforcement import reinforce_from_interaction
@@ -832,6 +833,18 @@ def api_extract_batch(req: ExtractBatchRequest | None = None) -> dict:
invoke this endpoint explicitly (cron, manual curl, CLI).
"""
payload = req or ExtractBatchRequest()
if payload.mode == "llm" and not _llm_cli_available():
raise HTTPException(
status_code=503,
detail=(
"LLM extraction unavailable in this runtime: the `claude` CLI "
"is not on PATH. Run host-side via "
"`scripts/batch_llm_extract_live.py` instead, or call this "
"endpoint with mode=\"rule\"."
),
)
since = payload.since
if not since:
@@ -916,11 +929,14 @@ def api_dashboard() -> dict:
"""One-shot system observability dashboard.
Returns memory counts by type/project/status, project state
entry counts, recent interaction volume, and extraction pipeline
entry counts, interaction volume by client, pipeline health
(harness, triage stats, last run), and extraction pipeline
status — everything an operator needs to understand AtoCore's
health beyond the basic /health endpoint.
"""
import json as _json
from collections import Counter
from datetime import datetime as _dt, timezone as _tz
all_memories = get_memories(active_only=False, limit=500)
active = [m for m in all_memories if m.status == "active"]
@@ -930,27 +946,81 @@ def api_dashboard() -> dict:
project_counts = dict(Counter(m.project or "(none)" for m in active))
reinforced = [m for m in active if m.reference_count > 0]
interactions = list_interactions(limit=1)
recent_interaction = interactions[0].created_at if interactions else None
# Interaction stats — total + by_client from DB directly
interaction_stats: dict = {"most_recent": None, "total": 0, "by_client": {}}
try:
from atocore.models.database import get_connection as _gc
# Extraction pipeline status
extract_state = {}
with _gc() as conn:
row = conn.execute("SELECT count(*) FROM interactions").fetchone()
interaction_stats["total"] = row[0] if row else 0
rows = conn.execute(
"SELECT client, count(*) FROM interactions GROUP BY client"
).fetchall()
interaction_stats["by_client"] = {r[0]: r[1] for r in rows}
row = conn.execute(
"SELECT created_at FROM interactions ORDER BY created_at DESC LIMIT 1"
).fetchone()
interaction_stats["most_recent"] = row[0] if row else None
except Exception:
interactions = list_interactions(limit=1)
interaction_stats["most_recent"] = (
interactions[0].created_at if interactions else None
)
# Pipeline health from project state
pipeline: dict = {}
extract_state: dict = {}
try:
state_entries = get_state("atocore")
for entry in state_entries:
if entry.category == "status" and entry.key == "last_extract_batch_run":
if entry.category != "status":
continue
if entry.key == "last_extract_batch_run":
extract_state["last_run"] = entry.value
elif entry.key == "pipeline_last_run":
pipeline["last_run"] = entry.value
try:
last = _dt.fromisoformat(entry.value.replace("Z", "+00:00"))
delta = _dt.now(_tz.utc) - last
pipeline["hours_since_last_run"] = round(
delta.total_seconds() / 3600, 1
)
except Exception:
pass
elif entry.key == "pipeline_summary":
try:
pipeline["summary"] = _json.loads(entry.value)
except Exception:
pipeline["summary_raw"] = entry.value
elif entry.key == "retrieval_harness_result":
try:
pipeline["harness"] = _json.loads(entry.value)
except Exception:
pipeline["harness_raw"] = entry.value
except Exception:
pass
# Project state counts
# Project state counts — include all registered projects
ps_counts = {}
for proj_id in ["p04-gigabit", "p05-interferometer", "p06-polisher", "atocore"]:
try:
entries = get_state(proj_id)
ps_counts[proj_id] = len(entries)
except Exception:
pass
try:
from atocore.projects.registry import load_project_registry as _lpr
for proj in _lpr():
try:
entries = get_state(proj.project_id)
ps_counts[proj.project_id] = len(entries)
except Exception:
pass
except Exception:
for proj_id in [
"p04-gigabit", "p05-interferometer", "p06-polisher", "atocore",
]:
try:
entries = get_state(proj_id)
ps_counts[proj_id] = len(entries)
except Exception:
pass
return {
"memories": {
@@ -964,10 +1034,9 @@ def api_dashboard() -> dict:
"counts": ps_counts,
"total": sum(ps_counts.values()),
},
"interactions": {
"most_recent": recent_interaction,
},
"interactions": interaction_stats,
"extraction_pipeline": extract_state,
"pipeline": pipeline,
}

View File

@@ -104,6 +104,21 @@ class Settings(BaseSettings):
@property
def resolved_project_registry_path(self) -> Path:
"""Path to the project registry JSON file.
If ``ATOCORE_PROJECT_REGISTRY_DIR`` env var is set, the registry
lives at ``<that dir>/project-registry.json``. Otherwise falls
back to the configured ``project_registry_path`` field.
This lets Docker deployments point at a mounted volume via env
var without the ephemeral in-image ``/app/config/`` getting
wiped on every rebuild.
"""
import os
registry_dir = os.environ.get("ATOCORE_PROJECT_REGISTRY_DIR", "").strip()
if registry_dir:
return Path(registry_dir) / "project-registry.json"
return self._resolve_path(self.project_registry_path)
@property

View File

@@ -0,0 +1,183 @@
"""Shared LLM-extractor prompt + parser (stdlib-only).
R12: single source of truth for the system prompt, memory type set,
size limits, and raw JSON parsing used by both paths that shell out
to ``claude -p``:
- ``atocore.memory.extractor_llm`` (in-container extractor, wraps the
parsed dicts in ``MemoryCandidate`` with registry-checked project
attribution)
- ``scripts/batch_llm_extract_live.py`` (host-side extractor, can't
import the full atocore package because Dalidou's host Python lacks
the container's deps; imports this module via ``sys.path``)
This module MUST stay stdlib-only. No ``atocore`` imports, no third-
party packages. Callers apply their own project-attribution policy on
top of the normalized dicts this module emits.
"""
from __future__ import annotations
import json
from typing import Any
LLM_EXTRACTOR_VERSION = "llm-0.4.0"
MAX_RESPONSE_CHARS = 8000
MAX_PROMPT_CHARS = 2000
MEMORY_TYPES = {"identity", "preference", "project", "episodic", "knowledge", "adaptation"}
SYSTEM_PROMPT = """You extract memory candidates from LLM conversation turns for a personal context engine called AtoCore.
AtoCore is the brain for Atomaste's engineering work. Known projects:
p04-gigabit, p05-interferometer, p06-polisher, atomizer-v2, atocore,
abb-space. Unknown project names — still tag them, the system auto-detects.
Your job is to emit SIGNALS that matter for future context. Be aggressive:
err on the side of capturing useful signal. Triage filters noise downstream.
WHAT TO EMIT (in order of importance):
1. PROJECT ACTIVITY — any mention of a project with context worth remembering:
- "Schott quote received for ABB-Space" (event + project)
- "Cédric asked about p06 firmware timing" (stakeholder event)
- "Still waiting on Zygo lead-time from Nabeel" (blocker status)
- "p05 vendor decision needs to happen this week" (action item)
2. DECISIONS AND CHOICES — anything that commits to a direction:
- "Going with Zygo Verifire SV for p05" (decision)
- "Dropping stitching from primary workflow" (design choice)
- "USB SSD mandatory, not SD card" (architectural commitment)
3. DURABLE ENGINEERING INSIGHT — earned knowledge that generalizes:
- "CTE gradient dominates WFE at F/1.2" (materials insight)
- "Preston model breaks below 5N because contact assumption fails"
- "m=1 coma NOT correctable by force modulation" (controls insight)
Test: would a competent engineer NEED experience to know this?
If it's textbook/google-findable, skip it.
4. STAKEHOLDER AND VENDOR EVENTS:
- "Email sent to Nabeel 2026-04-13 asking for lead time"
- "Meeting with Jason on Table 7 next Tuesday"
- "Starspec wants updated CAD by Friday"
5. PREFERENCES AND ADAPTATIONS that shape how Antoine works:
- "Antoine prefers OAuth over API keys"
- "Extraction stays off the capture hot path"
WHAT TO SKIP:
- Pure conversational filler ("ok thanks", "let me check")
- Instructional help content ("run this command", "here's how to...")
- Obvious textbook facts anyone can google in 30 seconds
- Session meta-chatter ("let me commit this", "deploy running")
- Transient system state snapshots ("36 active memories right now")
CANDIDATE TYPES — choose the best fit:
- project — a fact, decision, or event specific to one named project
- knowledge — durable engineering insight (use domain, not project)
- preference — how Antoine works / wants things done
- adaptation — a standing rule or adjustment to behavior
- episodic — a stakeholder event or milestone worth remembering
DOMAINS for knowledge candidates (required when type=knowledge and project is empty):
physics, materials, optics, mechanics, manufacturing, metrology,
controls, software, math, finance, business
TRUST HIERARCHY:
- project-specific: set project to the project id, leave domain empty
- domain knowledge: set domain, leave project empty
- events/activity: use project, type=project or episodic
- one conversation can produce MULTIPLE candidates — emit them all
OUTPUT RULES:
- Each candidate content under 250 characters, stands alone
- Default confidence 0.5. Raise to 0.7 only for ratified/committed claims.
- Raw JSON array, no prose, no markdown fences
- Empty array [] is fine when the conversation has no durable signal
Each element:
{"type": "project|knowledge|preference|adaptation|episodic", "content": "...", "project": "...", "domain": "", "confidence": 0.5}"""
def build_user_message(prompt: str, response: str, project_hint: str) -> str:
prompt_excerpt = (prompt or "")[:MAX_PROMPT_CHARS]
response_excerpt = (response or "")[:MAX_RESPONSE_CHARS]
return (
f"PROJECT HINT (may be empty): {project_hint or ''}\n\n"
f"USER PROMPT:\n{prompt_excerpt}\n\n"
f"ASSISTANT RESPONSE:\n{response_excerpt}\n\n"
"Return the JSON array now."
)
def parse_llm_json_array(raw_output: str) -> list[dict[str, Any]]:
"""Strip markdown fences / leading prose and return the parsed JSON
array as a list of raw dicts. Returns an empty list on any parse
failure — callers decide whether to log."""
text = (raw_output or "").strip()
if text.startswith("```"):
text = text.strip("`")
nl = text.find("\n")
if nl >= 0:
text = text[nl + 1:]
if text.endswith("```"):
text = text[:-3]
text = text.strip()
if not text or text == "[]":
return []
if not text.lstrip().startswith("["):
start = text.find("[")
end = text.rfind("]")
if start >= 0 and end > start:
text = text[start:end + 1]
try:
parsed = json.loads(text)
except json.JSONDecodeError:
return []
if not isinstance(parsed, list):
return []
return [item for item in parsed if isinstance(item, dict)]
def normalize_candidate_item(item: dict[str, Any]) -> dict[str, Any] | None:
"""Validate and normalize one raw model item into a candidate dict.
Returns None if the item fails basic validation (unknown type,
empty content). Does NOT apply project-attribution policy — that's
the caller's job, since the registry-check differs between the
in-container path and the host path.
Output keys: type, content, project (raw model value), domain,
confidence.
"""
mem_type = str(item.get("type") or "").strip().lower()
content = str(item.get("content") or "").strip()
if mem_type not in MEMORY_TYPES or not content:
return None
model_project = str(item.get("project") or "").strip()
domain = str(item.get("domain") or "").strip().lower()
try:
confidence = float(item.get("confidence", 0.5))
except (TypeError, ValueError):
confidence = 0.5
confidence = max(0.0, min(1.0, confidence))
if domain and not model_project:
content = f"[{domain}] {content}"
return {
"type": mem_type,
"content": content[:1000],
"project": model_project,
"domain": domain,
"confidence": confidence,
}

View File

@@ -49,7 +49,6 @@ Implementation notes:
from __future__ import annotations
import json
import os
import shutil
import subprocess
@@ -58,92 +57,21 @@ from dataclasses import dataclass
from functools import lru_cache
from atocore.interactions.service import Interaction
from atocore.memory._llm_prompt import (
LLM_EXTRACTOR_VERSION,
SYSTEM_PROMPT as _SYSTEM_PROMPT,
build_user_message,
normalize_candidate_item,
parse_llm_json_array,
)
from atocore.memory.extractor import MemoryCandidate
from atocore.memory.service import MEMORY_TYPES
from atocore.observability.logger import get_logger
log = get_logger("extractor_llm")
LLM_EXTRACTOR_VERSION = "llm-0.4.0"
DEFAULT_MODEL = os.environ.get("ATOCORE_LLM_EXTRACTOR_MODEL", "sonnet")
DEFAULT_TIMEOUT_S = float(os.environ.get("ATOCORE_LLM_EXTRACTOR_TIMEOUT_S", "90"))
MAX_RESPONSE_CHARS = 8000
MAX_PROMPT_CHARS = 2000
_SYSTEM_PROMPT = """You extract memory candidates from LLM conversation turns for a personal context engine called AtoCore.
AtoCore is the brain for Atomaste's engineering work. Known projects:
p04-gigabit, p05-interferometer, p06-polisher, atomizer-v2, atocore,
abb-space. Unknown project names — still tag them, the system auto-detects.
Your job is to emit SIGNALS that matter for future context. Be aggressive:
err on the side of capturing useful signal. Triage filters noise downstream.
WHAT TO EMIT (in order of importance):
1. PROJECT ACTIVITY — any mention of a project with context worth remembering:
- "Schott quote received for ABB-Space" (event + project)
- "Cédric asked about p06 firmware timing" (stakeholder event)
- "Still waiting on Zygo lead-time from Nabeel" (blocker status)
- "p05 vendor decision needs to happen this week" (action item)
2. DECISIONS AND CHOICES — anything that commits to a direction:
- "Going with Zygo Verifire SV for p05" (decision)
- "Dropping stitching from primary workflow" (design choice)
- "USB SSD mandatory, not SD card" (architectural commitment)
3. DURABLE ENGINEERING INSIGHT — earned knowledge that generalizes:
- "CTE gradient dominates WFE at F/1.2" (materials insight)
- "Preston model breaks below 5N because contact assumption fails"
- "m=1 coma NOT correctable by force modulation" (controls insight)
Test: would a competent engineer NEED experience to know this?
If it's textbook/google-findable, skip it.
4. STAKEHOLDER AND VENDOR EVENTS:
- "Email sent to Nabeel 2026-04-13 asking for lead time"
- "Meeting with Jason on Table 7 next Tuesday"
- "Starspec wants updated CAD by Friday"
5. PREFERENCES AND ADAPTATIONS that shape how Antoine works:
- "Antoine prefers OAuth over API keys"
- "Extraction stays off the capture hot path"
WHAT TO SKIP:
- Pure conversational filler ("ok thanks", "let me check")
- Instructional help content ("run this command", "here's how to...")
- Obvious textbook facts anyone can google in 30 seconds
- Session meta-chatter ("let me commit this", "deploy running")
- Transient system state snapshots ("36 active memories right now")
CANDIDATE TYPES — choose the best fit:
- project — a fact, decision, or event specific to one named project
- knowledge — durable engineering insight (use domain, not project)
- preference — how Antoine works / wants things done
- adaptation — a standing rule or adjustment to behavior
- episodic — a stakeholder event or milestone worth remembering
DOMAINS for knowledge candidates (required when type=knowledge and project is empty):
physics, materials, optics, mechanics, manufacturing, metrology,
controls, software, math, finance, business
TRUST HIERARCHY:
- project-specific: set project to the project id, leave domain empty
- domain knowledge: set domain, leave project empty
- events/activity: use project, type=project or episodic
- one conversation can produce MULTIPLE candidates — emit them all
OUTPUT RULES:
- Each candidate content under 250 characters, stands alone
- Default confidence 0.5. Raise to 0.7 only for ratified/committed claims.
- Raw JSON array, no prose, no markdown fences
- Empty array [] is fine when the conversation has no durable signal
Each element:
{"type": "project|knowledge|preference|adaptation|episodic", "content": "...", "project": "...", "domain": "", "confidence": 0.5}"""
@dataclass
@@ -206,13 +134,10 @@ def extract_candidates_llm_verbose(
if not response_text:
return LLMExtractionResult(candidates=[], raw_output="", error="empty_response")
prompt_excerpt = (interaction.prompt or "")[:MAX_PROMPT_CHARS]
response_excerpt = response_text[:MAX_RESPONSE_CHARS]
user_message = (
f"PROJECT HINT (may be empty): {interaction.project or ''}\n\n"
f"USER PROMPT:\n{prompt_excerpt}\n\n"
f"ASSISTANT RESPONSE:\n{response_excerpt}\n\n"
"Return the JSON array now."
user_message = build_user_message(
interaction.prompt or "",
response_text,
interaction.project or "",
)
args = [
@@ -270,50 +195,25 @@ def extract_candidates_llm_verbose(
def _parse_candidates(raw_output: str, interaction: Interaction) -> list[MemoryCandidate]:
"""Parse the model's JSON output into MemoryCandidate objects.
Tolerates common model glitches: surrounding whitespace, stray
markdown fences, leading/trailing prose. Silently drops malformed
array elements rather than raising.
Shared stripping + per-item validation live in
``atocore.memory._llm_prompt``. This function adds the container-
only R9 project attribution: registry-check model_project and fall
back to the interaction scope when set.
"""
text = raw_output.strip()
if text.startswith("```"):
text = text.strip("`")
first_newline = text.find("\n")
if first_newline >= 0:
text = text[first_newline + 1 :]
if text.endswith("```"):
text = text[:-3]
text = text.strip()
if not text or text == "[]":
return []
if not text.lstrip().startswith("["):
start = text.find("[")
end = text.rfind("]")
if start >= 0 and end > start:
text = text[start : end + 1]
try:
parsed = json.loads(text)
except json.JSONDecodeError as exc:
log.error("llm_extractor_parse_failed", error=str(exc), raw_prefix=raw_output[:120])
return []
if not isinstance(parsed, list):
return []
raw_items = parse_llm_json_array(raw_output)
if not raw_items and raw_output.strip() not in ("", "[]"):
log.error("llm_extractor_parse_failed", raw_prefix=raw_output[:120])
results: list[MemoryCandidate] = []
for item in parsed:
if not isinstance(item, dict):
for raw_item in raw_items:
normalized = normalize_candidate_item(raw_item)
if normalized is None:
continue
mem_type = str(item.get("type") or "").strip().lower()
content = str(item.get("content") or "").strip()
model_project = str(item.get("project") or "").strip()
# R9 trust hierarchy for project attribution:
# 1. Interaction scope always wins when set (strongest signal)
# 2. Model project used only when interaction is unscoped
# AND model project resolves to a registered project
# 3. Empty string when both are empty/unregistered
model_project = normalized["project"]
# R9 trust hierarchy: interaction scope wins; else registry-
# resolve the model's tag; else keep the model's tag so auto-
# triage can surface unregistered projects.
if interaction.project:
project = interaction.project
elif model_project:
@@ -328,9 +228,6 @@ def _parse_candidates(raw_output: str, interaction: Interaction) -> list[MemoryC
if resolved in registered_ids:
project = resolved
else:
# Unregistered project — keep the model's tag so
# auto-triage / the operator can see it and decide
# whether to register it as a new project or lead.
project = model_project
log.info(
"unregistered_project_detected",
@@ -338,34 +235,19 @@ def _parse_candidates(raw_output: str, interaction: Interaction) -> list[MemoryC
interaction_id=interaction.id,
)
except Exception:
project = model_project if model_project else ""
project = model_project
else:
project = ""
domain = str(item.get("domain") or "").strip().lower()
confidence_raw = item.get("confidence", 0.5)
if mem_type not in MEMORY_TYPES:
continue
if not content:
continue
# Domain knowledge: embed the domain tag in the content so it
# survives without a schema migration. The context builder
# can match on it via query-relevance ranking, and a future
# migration can parse it into a proper column.
if domain and not project:
content = f"[{domain}] {content}"
try:
confidence = float(confidence_raw)
except (TypeError, ValueError):
confidence = 0.5
confidence = max(0.0, min(1.0, confidence))
content = normalized["content"]
results.append(
MemoryCandidate(
memory_type=mem_type,
content=content[:1000],
memory_type=normalized["type"],
content=content,
rule="llm_extraction",
source_span=content[:200],
project=project,
confidence=confidence,
confidence=normalized["confidence"],
source_interaction_id=interaction.id,
extractor_version=LLM_EXTRACTOR_VERSION,
)

View File

@@ -340,6 +340,84 @@ def reinforce_memory(
return True, old_confidence, new_confidence
def auto_promote_reinforced(
min_reference_count: int = 3,
min_confidence: float = 0.7,
max_age_days: int = 14,
) -> list[str]:
"""Auto-promote candidate memories with strong reinforcement signals.
Phase 10: memories that have been reinforced by multiple interactions
graduate from candidate to active without human review. This rewards
knowledge that the system keeps referencing organically.
Returns a list of promoted memory IDs.
"""
from datetime import timedelta
cutoff = (
datetime.now(timezone.utc) - timedelta(days=max_age_days)
).strftime("%Y-%m-%d %H:%M:%S")
promoted: list[str] = []
with get_connection() as conn:
rows = conn.execute(
"SELECT id, content, memory_type, project, confidence, "
"reference_count FROM memories "
"WHERE status = 'candidate' "
"AND COALESCE(reference_count, 0) >= ? "
"AND confidence >= ? "
"AND last_referenced_at >= ?",
(min_reference_count, min_confidence, cutoff),
).fetchall()
for row in rows:
mid = row["id"]
ok = promote_memory(mid)
if ok:
promoted.append(mid)
log.info(
"memory_auto_promoted",
memory_id=mid,
memory_type=row["memory_type"],
project=row["project"] or "(global)",
reference_count=row["reference_count"],
confidence=round(row["confidence"], 3),
)
return promoted
def expire_stale_candidates(
max_age_days: int = 14,
) -> list[str]:
"""Reject candidate memories that sat in queue too long unreinforced.
Candidates older than ``max_age_days`` with zero reinforcement are
auto-rejected to prevent unbounded queue growth. Returns rejected IDs.
"""
from datetime import timedelta
cutoff = (
datetime.now(timezone.utc) - timedelta(days=max_age_days)
).strftime("%Y-%m-%d %H:%M:%S")
expired: list[str] = []
with get_connection() as conn:
rows = conn.execute(
"SELECT id FROM memories "
"WHERE status = 'candidate' "
"AND COALESCE(reference_count, 0) = 0 "
"AND created_at < ?",
(cutoff,),
).fetchall()
for row in rows:
mid = row["id"]
ok = reject_candidate_memory(mid)
if ok:
expired.append(mid)
log.info("memory_expired", memory_id=mid)
return expired
def get_memories_for_context(
memory_types: list[str] | None = None,
project: str | None = None,

View File

@@ -171,3 +171,38 @@ def test_llm_extraction_failure_returns_empty(tmp_data_dir, monkeypatch):
# Nothing in the candidate queue
queue = get_memories(status="candidate", limit=10)
assert len(queue) == 0
def test_extract_batch_api_503_when_cli_missing(tmp_data_dir, monkeypatch):
"""R11: POST /admin/extract-batch with mode=llm must fail loud when
the `claude` CLI is unavailable, instead of silently returning a
success-with-0-candidates payload (which masked host-vs-container
truth for operators)."""
from fastapi.testclient import TestClient
from atocore.main import app
import atocore.api.routes as routes
init_db()
monkeypatch.setattr(routes, "_llm_cli_available", lambda: False)
client = TestClient(app)
response = client.post("/admin/extract-batch", json={"mode": "llm"})
assert response.status_code == 503
assert "claude" in response.json()["detail"].lower()
def test_extract_batch_api_rule_mode_ok_without_cli(tmp_data_dir, monkeypatch):
"""Rule mode must still work when the LLM CLI is missing — R11 only
affects mode=llm."""
from fastapi.testclient import TestClient
from atocore.main import app
import atocore.api.routes as routes
init_db()
monkeypatch.setattr(routes, "_llm_cli_available", lambda: False)
client = TestClient(app)
response = client.post("/admin/extract-batch", json={"mode": "rule"})
assert response.status_code == 200

View File

@@ -186,3 +186,98 @@ def test_memories_for_context_empty(isolated_db):
text, chars = get_memories_for_context()
assert text == ""
assert chars == 0
# --- Phase 10: auto-promotion + candidate expiry ---
def _get_memory_by_id(memory_id):
"""Helper: fetch a single memory by ID."""
from atocore.models.database import get_connection
with get_connection() as conn:
row = conn.execute("SELECT * FROM memories WHERE id = ?", (memory_id,)).fetchone()
return dict(row) if row else None
def test_auto_promote_reinforced_basic(isolated_db):
from atocore.memory.service import (
auto_promote_reinforced,
create_memory,
reinforce_memory,
)
mem_obj = create_memory("knowledge", "Zerodur has near-zero CTE", status="candidate", confidence=0.7)
mid = mem_obj.id
# reinforce_memory only touches active memories, so we need to
# promote first to reinforce, then demote back to candidate —
# OR just bump reference_count + last_referenced_at directly
from atocore.models.database import get_connection
from datetime import datetime, timezone
now = datetime.now(timezone.utc).strftime("%Y-%m-%d %H:%M:%S")
with get_connection() as conn:
conn.execute(
"UPDATE memories SET reference_count = 3, last_referenced_at = ? WHERE id = ?",
(now, mid),
)
promoted = auto_promote_reinforced(min_reference_count=3, min_confidence=0.7)
assert mid in promoted
mem = _get_memory_by_id(mid)
assert mem["status"] == "active"
def test_auto_promote_reinforced_ignores_low_refs(isolated_db):
from atocore.memory.service import auto_promote_reinforced, create_memory
from atocore.models.database import get_connection
from datetime import datetime, timezone
mem_obj = create_memory("knowledge", "Some knowledge", status="candidate", confidence=0.7)
mid = mem_obj.id
now = datetime.now(timezone.utc).strftime("%Y-%m-%d %H:%M:%S")
with get_connection() as conn:
conn.execute(
"UPDATE memories SET reference_count = 1, last_referenced_at = ? WHERE id = ?",
(now, mid),
)
promoted = auto_promote_reinforced(min_reference_count=3, min_confidence=0.7)
assert mid not in promoted
mem = _get_memory_by_id(mid)
assert mem["status"] == "candidate"
def test_expire_stale_candidates(isolated_db):
from atocore.memory.service import create_memory, expire_stale_candidates
from atocore.models.database import get_connection
mem_obj = create_memory("knowledge", "Old unreferenced fact", status="candidate")
mid = mem_obj.id
with get_connection() as conn:
conn.execute(
"UPDATE memories SET created_at = datetime('now', '-30 days') WHERE id = ?",
(mid,),
)
expired = expire_stale_candidates(max_age_days=14)
assert mid in expired
mem = _get_memory_by_id(mid)
assert mem["status"] == "invalid"
def test_expire_stale_candidates_keeps_reinforced(isolated_db):
from atocore.memory.service import create_memory, expire_stale_candidates
from atocore.models.database import get_connection
mem_obj = create_memory("knowledge", "Referenced fact", status="candidate")
mid = mem_obj.id
with get_connection() as conn:
conn.execute(
"UPDATE memories SET reference_count = 1, "
"created_at = datetime('now', '-30 days') WHERE id = ?",
(mid,),
)
expired = expire_stale_candidates(max_age_days=14)
assert mid not in expired
mem = _get_memory_by_id(mid)
assert mem["status"] == "candidate"