2025-11-16 13:35:41 -05:00
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# Changelog
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All notable changes to Atomizer will be documented in this file.
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The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/).
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## [Unreleased]
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2026-01-24 15:17:34 -05:00
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## [0.5.0] - 2025-01-24
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### Project Cleanup & Organization
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- Deleted 102+ orphaned MCP session temp files
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- Removed build artifacts (htmlcov, dist, __pycache__)
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- Archived superseded plan documents (RALPH_LOOP V2/V3, CANVAS V3, etc.)
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- Moved debug/analysis scripts from tests/ to tools/analysis/
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- Updated .gitignore with missing patterns
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- Cleaned empty directories
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## [0.4.0] - 2025-01-22
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### Canvas UX Improvements (Phases 7-9)
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- **Resizable Panels**: Left sidebar (200-400px) and right panel (280-600px) with localStorage persistence
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- **All Palette Items Enabled**: All 8 node types now draggable (model, solver, designVar, extractor, objective, constraint, algorithm, surrogate)
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- **Solver Configuration**: Engine selection (NX Nastran, MSC Nastran, Python Script) with solution type dropdowns (SOL101-SOL200)
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### AtomizerSpec v2.0
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- Unified JSON configuration schema for all studies
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- Added SolverEngine and NastranSolutionType types
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- Canvas position persistence for all nodes
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- Migration support from legacy optimization_config.json
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## [0.3.0] - 2025-01-18
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### Dashboard V3.1 - Canvas Builder
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- Visual workflow builder with 9 node types
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- Spec ↔ ReactFlow bidirectional converter
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- WebSocket real-time synchronization
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- Claude chat integration
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- Custom extractors with in-canvas code editor
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- Model introspection panel
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### Learning Atomizer Core (LAC)
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- Persistent memory system for accumulated knowledge
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- Session insights recording (failures, workarounds, patterns)
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- Optimization outcome tracking
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## [0.2.5] - 2025-01-16
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### GNN Surrogate for Zernike Optimization
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- PolarMirrorGraph with fixed 3000-node polar grid
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- ZernikeGNN model with design-conditioned convolutions
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- Differentiable GPU-accelerated Zernike fitting
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- Training pipeline with multi-task loss
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### DevLoop Automation
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- Closed-loop development system with AI agents
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- Gemini planning, Claude implementation
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- Playwright browser testing for dashboard UI
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## [0.2.1] - 2025-01-07
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### Optimization Engine v2.0 Restructure
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- Reorganized into modular subpackages (core/, nx/, study/, config/)
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- SpecManager for AtomizerSpec handling
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- Deprecation warnings for old import paths
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2025-11-24 07:49:48 -05:00
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### Phase 3.3 - Dashboard & Multi-Solution Support (November 23, 2025)
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#### Added
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- **React Dashboard** with comprehensive multi-objective visualization
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- Parallel Coordinates Plot with research-based design
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- Light theme with high-visibility colors (white background, dark text)
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- Interactive trial selection and highlighting
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- Color-coded axes: Design Variables (blue) → Objectives (green) → Constraints (yellow)
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- Automatic constraint extraction from trial user_attrs
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- Support for units display (mm, MPa, Hz, g, etc.)
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- Pareto Front scatter plot for multi-objective optimization
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- Real-time WebSocket updates for live monitoring
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- FastAPI backend (port 8000) with Vite frontend (port 3003)
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- Optimizer Strategy Panel showing algorithm info and metrics
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- Comprehensive dashboard documentation: [DASHBOARD.md](docs/DASHBOARD.md)
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- **NX Multi-Solution Protocol** documentation
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- Critical fix for multi-solution workflows documented
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- Best practices for static + modal, thermal + structural simulations
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- [NX_MULTI_SOLUTION_PROTOCOL.md](docs/NX_MULTI_SOLUTION_PROTOCOL.md)
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- **Centralized Extractor Library**
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- `optimization_engine/extractors/` with base classes
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- Eliminates code duplication across studies
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- Unified error handling and OP2 file processing
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#### Changed
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- **CRITICAL FIX**: Multi-solution NX workflows now use `SolveAllSolutions()` API
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- Ensures all solutions (static + modal, etc.) complete before returning
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- Uses Foreground mode for reliable multi-solution solves
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- Prevents stale OP2 files and identical results across trials
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- Implementation in `optimization_engine/solve_simulation.py` lines 271-295
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#### Fixed
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- Multi-solution NX simulations only solving first solution
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- Parallel coordinates plot crashes due to undefined axis labels
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- Dashboard page crashes from missing data validation
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- Identical frequency values across trials in multi-solution studies
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- NaN values in constraint visualization
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2025-11-17 12:34:06 -05:00
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### Phase 3.2 - Integration & NX Enhancements (In Progress)
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#### Added
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- **NX Expression Import System** (2025-11-17)
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- Robust .exp file-based expression updates via NX journal scripts
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- Supports ALL NX expression types including binary-stored ones
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- Automatic unit detection and formatting
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- Fixes issue with `hole_count` and other feature-linked expressions
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- Documentation: [NX_EXPRESSION_IMPORT_SYSTEM.md](docs/NX_EXPRESSION_IMPORT_SYSTEM.md)
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- New journal: `import_expressions.py` for .exp file import
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- Enhanced `nx_updater.py` with `update_expressions_via_import()` method
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- **4D Design Space Validation** (2025-11-17)
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- Validated full 4-variable optimization (beam_half_core_thickness, beam_face_thickness, holes_diameter, hole_count)
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- All variables now updating correctly in optimization loop
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- Mesh adaptation verified across different hole_count values
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### Phase 2 - LLM Integration (Completed 85%)
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2025-11-16 13:35:41 -05:00
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- Natural language interface for optimization configuration
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- Feature registry with capability catalog
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- Claude skill for Atomizer navigation
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2025-11-17 12:34:06 -05:00
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- LLM workflow analyzer and extractor orchestration
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- Dynamic code generation for hooks and extractors
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2025-11-16 13:35:41 -05:00
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---
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## [0.2.0] - 2025-01-16
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### Phase 1 - Plugin System & Infrastructure ✅
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#### Added
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- **Plugin Architecture**
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- Hook manager with lifecycle execution at `pre_solve`, `post_solve`, and `post_extraction` points
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- Plugin auto-discovery from `optimization_engine/plugins/` directory
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- Priority-based hook execution
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- Context passing system for hooks (output_dir, trial_number, design_variables, results)
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- **Logging Infrastructure**
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- Detailed per-trial logs in `optimization_results/trial_logs/`
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- Complete iteration trace with timestamps
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- Design variables, configuration, execution timeline
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- Extracted results and constraint evaluations
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- High-level optimization progress log (`optimization.log`)
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- Configuration summary header
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- Trial START and COMPLETE entries (one line per trial)
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- Compact format for easy progress monitoring
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- **Logging Plugins**
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- `detailed_logger.py` - Creates detailed trial logs
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- `optimization_logger.py` - Creates high-level optimization.log
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- `log_solve_complete.py` - Appends solve completion to trial logs
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- `log_results.py` - Appends extracted results to trial logs
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- `optimization_logger_results.py` - Appends results to optimization.log
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- **Project Organization**
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- Studies folder structure with standardized layout
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- Comprehensive studies documentation ([studies/README.md](studies/README.md))
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- Model files organized in `model/` subdirectory (`.prt`, `.sim`, `.fem`)
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- Intelligent path resolution system (`atomizer_paths.py`)
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- Marker-based project root detection
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- **Test Suite**
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- `test_hooks_with_bracket.py` - Hook validation test (3 trials)
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- `run_5trial_test.py` - Quick integration test (5 trials)
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- `test_journal_optimization.py` - Full optimization test
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#### Changed
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- Renamed `examples/` folder to `studies/`
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- Moved bracket example to `studies/bracket_stress_minimization/`
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- Consolidated FEA files into `model/` subfolder
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- Updated all test scripts to use `atomizer_paths` for imports
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- Runner now passes `output_dir` to all hook contexts
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#### Removed
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- Obsolete test scripts from examples/ (14 files deleted)
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- `optimization_logs/` and `optimization_results/` from root directory
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#### Fixed
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- Log files now correctly generated in study-specific `optimization_results/` folder
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- Path resolution works regardless of script location
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- Hooks properly registered with `register_hooks()` function
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---
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## [0.1.0] - 2025-01-10
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### Initial Release
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#### Core Features
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- Optuna integration with TPE sampler
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- NX journal integration for expression updates and simulation execution
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- OP2 result extraction (stress, displacement)
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- Study management with folder-based isolation
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- Web dashboard for real-time monitoring
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- Precision control (4-decimal rounding for mm/degrees/MPa)
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- Crash recovery and optimization resumption
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---
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## Development Timeline
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- **Phase 1** (✅ Completed 2025-01-16): Plugin system & hooks
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- **Phase 2** (🟡 Starting): LLM interface with natural language configuration
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- **Phase 3** (Planned): Dynamic code generation for custom objectives
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- **Phase 4** (Planned): Intelligent analysis and surrogate quality assessment
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- **Phase 5** (Planned): Automated HTML/PDF report generation
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- **Phase 6** (Planned): NX MCP server with full API documentation
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- **Phase 7** (Planned): Self-improving feature registry
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---
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**Maintainer**: Antoine Polvé (antoine@atomaste.com)
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**License**: Proprietary - Atomaste © 2025
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