From 1f58bb8016af6aada86b37da90b58962f7c81ecc Mon Sep 17 00:00:00 2001
From: Antoine <antoine.letarte@gmail.com>
Date: Mon, 23 Feb 2026 10:00:17 +0000
Subject: [PATCH] chore(hq): daily sync 2026-02-23

---
 hq/workspaces/manager/memory/2026-02-22.md    |  59 ++++
 hq/workspaces/manager/memory/2026-02-23.md    |  35 +++
 hq/workspaces/shared/PROJECT_STATUS.md        |  25 +-
 hq/workspaces/shared/project_log.md           |   2 +
 .../shared/reviews/v2-migration-audit.md      | 288 ++++++++++++++++++
 .../reviews/v2-migration-code-review.md       | 255 ++++++++++++++++
 hq/workspaces/shared/taskboard.json           |   7 +-
 7 files changed, 661 insertions(+), 10 deletions(-)
 create mode 100644 hq/workspaces/manager/memory/2026-02-23.md
 create mode 100644 hq/workspaces/shared/reviews/v2-migration-audit.md
 create mode 100644 hq/workspaces/shared/reviews/v2-migration-code-review.md

diff --git a/hq/workspaces/manager/memory/2026-02-22.md b/hq/workspaces/manager/memory/2026-02-22.md
index d1fa7006..ce5a18d9 100644
--- a/hq/workspaces/manager/memory/2026-02-22.md
+++ b/hq/workspaces/manager/memory/2026-02-22.md
@@ -34,3 +34,62 @@
 
 ### SELF-DOCUMENT
 - No changes needed — docs current
+
+---
+
+## AOM Project — MASSIVE Session (afternoon)
+
+### What Happened
+Antoine came in and asked about AOM project status. Resulted in a multi-hour session covering:
+
+1. **AOM Phase 3 completed** — wrote 6 remaining docs (Decision Log, Evolution Principles, Failure Patterns, Digestion Protocol, Context Engineering, Project KB Template). AOM went from ~85% → 100% content (30 docs, ~7,600 lines).
+
+2. **Phase 4 (LLM Layer) completed** — 3 docs: CLAUDE.md v2 (150 lines replacing 871-line v1), Context-Loading Strategy (4-layer system), AOM Skill Module.
+
+3. **Phase 5 (Living Protocol) completed** — maintenance rules, update triggers, health checks, ownership model.
+
+4. **Tool-Agnostic Architecture Plan** — Antoine asked for a plan to make Atomizer solver-agnostic. Researched the Arsenal doc (800+ lines), wrote `ATOMIZER-TOOL-AGNOSTIC-ARCHITECTURE.md` (28KB) with: 3 abstraction layers (contracts → processors → orchestrator), AtomizerSpec v3.0 with ToolchainConfig, 7-sprint implementation roadmap, V2 repo structure.
+
+5. **AOM V2 Integration** — Antoine said "document first, code later." Audited all 30 AOM docs for NX-hardcoding, created 5-phase integration plan. Executed ALL phases:
+   - Phase A: 4 new foundation docs (Tool-Agnostic Architecture, Data Contracts Reference, Processor Dev Guide, Arsenal Reference)
+   - Phase B: 5 core rewrites (System Architecture, Component Map, Codebase Architecture, Extension Points, Multi-Solver Roadmap)
+   - Phase C: 19 surgical updates across all pillars
+   - Phase D: 5 new solver guides (CalculiX, Gmsh, OpenFOAM, Multi-Physics, MCP Server Dev)
+   - Phase E: MAP + final updates
+
+   **Result: AOM grew from 37 → 48 docs, ~8,830 lines. Zero NX-only assumptions remain.**
+
+6. **V2 Migration Master Plan** — Antoine confirmed new repo at `http://192.168.86.50:3000/Antoine/Atomizer-V2` (Gitea, currently empty). Wrote comprehensive migration plan (28KB): complete V2 repo structure, what migrates vs doesn't, 6-phase execution (8 days), .gitignore, pyproject.toml, README.md draft, Obsidian sync strategy.
+
+### Key Decisions Made (by Antoine)
+- DEC-030: Tool-agnostic architecture approved
+- DEC-032: New repo (V2) instead of cleaning V1
+- DEC-033: Documentation-first — AOM before code
+- DEC-021: AOM stays in Obsidian until migration
+- V2 Gitea repo created at `192.168.86.50:3000/Antoine/Atomizer-V2`
+
+### CEO Decisions Still Pending (for migration)
+1. License type (Apache 2.0 / MIT)
+2. GitHub repo name
+3. Obsidian ↔ repo sync strategy
+4. HQ separation (in V2 or separate?)
+5. Confirm projects/ stays off git
+6. GitHub visibility (public/private)
+7. Timing to start
+
+### Files Created/Modified Today
+- `P-Atomizer-Operating-Manual/` — 11 new docs, 5 rewrites, 19 updates
+- `Atomizer-AtomasteAI/Development/ATOMIZER-TOOL-AGNOSTIC-ARCHITECTURE.md` (28KB)
+- `Atomizer-AtomasteAI/Development/ATOMIZER-V2-MIGRATION-MASTERPLAN.md` (28KB)
+- Integration plan archived to `P-Atomizer-Operating-Manual/Archive/`
+
+### Blocker: Sub-agent Spawning
+- `sessions_spawn` fails with "gateway closed (1008): pairing required" — both with `agentId=auditor` and without
+- This blocks delegating work to Auditor (or any sub-agent)
+- Asked Antoine for preference: self-review on Opus or wait for infra fix
+- No response yet as of 7pm
+
+### Next Steps
+- Awaiting Antoine's decision on auditor review approach (self vs wait for infra)
+- Antoine reviewing migration master plan
+- After CEO approval → execute Phase 0 (repo bootstrap + AOM deployment)
diff --git a/hq/workspaces/manager/memory/2026-02-23.md b/hq/workspaces/manager/memory/2026-02-23.md
new file mode 100644
index 00000000..fa3f79c7
--- /dev/null
+++ b/hq/workspaces/manager/memory/2026-02-23.md
@@ -0,0 +1,35 @@
+# 2026-02-23
+
+## Nightly Digestion — OP_11 (Incremental)
+
+### STORE
+- **AOM V2 Migration** is the dominant new workstream as of Feb 22. Massive session: AOM completed (48 docs, ~8,830 lines), tool-agnostic architecture approved (DEC-030), V2 repo created at `192.168.86.50:3000/Antoine/Atomizer-V2` (DEC-032), documentation-first approach confirmed (DEC-033).
+- Auditor delivered V2 migration audit (288 lines) identifying 11 findings including 13 missing V1 modules. Revised masterplan (V2) produced addressing all findings — 12-day realistic timeline.
+- Code review also delivered (`shared/reviews/v2-migration-code-review.md`, 255 lines).
+- 6 CEO decisions still pending for V2 migration: license type, GitHub name, sync strategy, HQ separation, projects/ exclusion, visibility, timing.
+- Sub-agent spawning broken ("gateway closed 1008: pairing required") — blocks delegation. Unresolved.
+
+### DISCARD
+- Memory files: oldest is Feb 8 (15 days) — within 30-day retention. No pruning needed.
+- No contradictions found in current memory.
+- No stale TODOs resolved since last cycle.
+
+### SORT
+- V2 Migration reviews correctly placed in `shared/reviews/` (project-level artifacts).
+- AOM docs live in Obsidian vault (correct — CEO decision DEC-021).
+- No patterns to promote from session-level to domain-level.
+
+### REPAIR
+- **PROJECT_STATUS.md needs update** — doesn't reflect AOM/V2 Migration project or auditor's V2 audit deliverable. Updating now.
+- Auditor P-Adaptive-Isogrid block: still unresolved (since Feb 16, now 7 days). Tech Lead has not responded.
+- Webster web_search API key: still needs Mario (since Feb 19).
+- Sub-agent spawning: broken since Feb 22 at minimum. Infrastructure issue for Mario.
+
+### EVOLVE
+- **Observation:** The Feb 22 session was a solo mega-session (Manager did everything — AOM writing, architecture, migration planning) because sub-agent spawning is broken. This is unsustainable for complex work. Sub-agent infra fix is critical.
+- **Observation:** 4 projects now awaiting CEO input simultaneously (Hydrotech Beam, Project Standard, Adaptive Isogrid, V2 Migration decisions). Priority triage essential when Antoine returns.
+- **Process note:** Auditor review via spawned sub-agent DID work on Feb 22 (delivered the V2 audit) — so spawning may be intermittent, not fully broken. Worth retesting.
+
+### SELF-DOCUMENT
+- PROJECT_STATUS.md updated to include AOM/V2 Migration project.
+- No other doc changes needed.
diff --git a/hq/workspaces/shared/PROJECT_STATUS.md b/hq/workspaces/shared/PROJECT_STATUS.md
index 64051600..2112fdf5 100644
--- a/hq/workspaces/shared/PROJECT_STATUS.md
+++ b/hq/workspaces/shared/PROJECT_STATUS.md
@@ -1,8 +1,17 @@
 # Project Status Dashboard
-Updated: 2026-02-20 04:00 AM (Nightly Digestion OP_11)
+Updated: 2026-02-23 04:00 AM (Nightly Digestion OP_11)
 
 ## Active Projects
 
+### 📦 AOM / V2 Migration (NEW — Feb 22)
+- **Phase:** Documentation complete, migration plan reviewed
+- **Status:** 🟡 AWAITING CEO DECISIONS (6 items)
+- **What happened:** AOM completed (48 docs, ~8,830 lines, zero NX-only assumptions). Tool-agnostic architecture approved (DEC-030). V2 repo created at `192.168.86.50:3000/Antoine/Atomizer-V2` (DEC-032). Migration masterplan written + audited (11 findings addressed in V2 plan, 12-day timeline).
+- **Deliverables ready:** AOM (Obsidian), V2 Migration Masterplan V2, Auditor audit, code review
+- **Location:** Obsidian vault `P-Atomizer-Operating-Manual/`, `shared/reviews/`
+- **Pending CEO decisions:** License type, GitHub name, Obsidian sync strategy, HQ separation, projects/ exclusion, repo visibility, timing to start
+- **Owner:** Manager
+
 ### 🔩 Hydrotech Beam — Optimization
 - **Phase:** DOE Phase 1 complete, awaiting Phase 2 (TPE)
 - **Status:** ⏸️ BLOCKED — Mass NaN fix committed (580ed65), needs pull + test on dalidou
@@ -33,11 +42,13 @@ Updated: 2026-02-20 04:00 AM (Nightly Digestion OP_11)
 - **Next:** Awaiting project context to produce recommendation
 - **Owner:** Webster
 
-## Pending Items
-- Auditor blocked on P-Adaptive-Isogrid review (needs Tech Lead response since Feb 16)
-- Secretary TASK-002 delivery failed (Slack token issue) — resolved via TASK-004
+## Outstanding Blockers
+- **Auditor** blocked on P-Adaptive-Isogrid review since Feb 16 (needs Tech Lead response)
+- **Webster** web_search API key missing (needs Mario, since Feb 19)
+- **Sub-agent spawning** intermittently broken ("pairing required" error, Feb 22)
+- **4 projects** simultaneously awaiting CEO input — triage needed
 
-## Recent Completions (last 7 days)
+## Recent Completions
+- 2026-02-22: AOM 100% complete (48 docs), tool-agnostic architecture, V2 migration plan + audit
 - 2026-02-18: Project standardization package assembled and reviewed
-- 2026-02-19: Auditor spec audit completed
-- 2026-02-17: System test orchestration validated (TASK-001 through TASK-004)
+- 2026-02-17: System test orchestration validated
diff --git a/hq/workspaces/shared/project_log.md b/hq/workspaces/shared/project_log.md
index 6534d760..8f0b02b1 100644
--- a/hq/workspaces/shared/project_log.md
+++ b/hq/workspaces/shared/project_log.md
@@ -33,3 +33,5 @@
 [2026-02-19 00:30 UTC] Auditor: Completed — Atomizer Project Standard spec audit (full report + executive summary)
 [2026-02-19 14:52] [webster] TASK-001: Status → in-progress — Started research
 [2026-02-19 14:53] [webster] TASK-001: Status → todo — Blocked: web_search tool is missing API key. See Slack DM.
+[2026-02-22 15:33] [webster] TASK-001: Status → todo — Blocked: web_search tool is failing (missing API key).
+[2026-02-22 19:30] auditor: Completed — Delivered audit-revised V2 Migration Master Plan (ATOMIZER-V2-MIGRATION-MASTERPLAN-V2.md). Addresses all 11 audit findings: complete file inventory (168 files mapped), 13 missing modules added, rollback procedures, verification checklists, import compatibility shim, pinned deps, pre-commit hooks, mid-study strategy, .gitignore fixes, realistic 12-day timeline.
diff --git a/hq/workspaces/shared/reviews/v2-migration-audit.md b/hq/workspaces/shared/reviews/v2-migration-audit.md
new file mode 100644
index 00000000..728bfa79
--- /dev/null
+++ b/hq/workspaces/shared/reviews/v2-migration-audit.md
@@ -0,0 +1,288 @@
+# V2 Migration Master Plan — Audit Report
+
+**Auditor:** Auditor Agent 🔍
+**Date:** 2026-02-22
+**Document Reviewed:** `ATOMIZER-V2-MIGRATION-MASTERPLAN.md`
+**Verdict:** 🟡 MAJOR issues found — plan is strong but has significant gaps that will cause problems during execution
+
+---
+
+## 1. Completeness — 🔴 CRITICAL GAPS
+
+### 1.1 Missing V1 Modules (Not Accounted For)
+
+The migration plan lists modules to port but **misses at least 8 significant V1 subpackages**:
+
+| V1 Module | Files | Purpose | Impact if Missed |
+|-----------|-------|---------|-----------------|
+| `optimization_engine/context/` | 7 files | Session state, compaction, feedback loop, playbook, reflector | 🔴 Core runtime functionality — sessions won't persist state |
+| `optimization_engine/study/` | 8 files | Study creator, wizard, continuation, reset, benchmarking, state, history | 🔴 Can't create or manage studies without this |
+| `optimization_engine/utils/` | 12 files | Logger, dashboard_db, trial_manager, NX file discovery, study archiver, realtime tracking | 🔴 Infrastructure that everything depends on |
+| `optimization_engine/plugins/` | 4 files | hook_manager, hooks, validators (DIFFERENT from `hooks/`) | 🟡 Plugin system won't work |
+| `optimization_engine/intake/` | 3 files | Config intake, context intake, processor | 🟡 Study intake pipeline broken |
+| `optimization_engine/validation/` | 3 files | checker.py, gate.py (DIFFERENT from `validators/`) | 🟡 Validation gates lost |
+| `optimization_engine/model_discovery/` | 2 files | NX model introspection | 🟡 Model discovery capability lost |
+| `optimization_engine/devloop/` | 7 files | Analyzer, orchestrator, planning, test_runner, browser scenarios | 🟢 DevLoop was planned for `tools/devloop_cli.py` but the full subpackage has 7 files |
+| `optimization_engine/processors/` | 2 files | adaptive_characterization.py | 🟡 V1 already has a `processors/` concept |
+| `optimization_engine/future/` | 11 files | Research agents, LLM workflow analyzer, step classifier | 🟢 May be intentionally excluded, but not listed in "DO NOT MIGRATE" |
+| `optimization_engine/custom_functions/` | 2 files | NX material generator | 🟢 Utility, should be documented |
+| `optimization_engine/templates/` | 3 files | run_optimization_template, run_nn_optimization_template | 🟡 Template system for studies |
+| `optimization_engine/surrogates/` | 1 file | `__init__.py` (separate from `gnn/`) | 🟢 Minor |
+
+### 1.2 Missing V1 Core Files
+
+| V1 File | Role | Plan Status |
+|---------|------|-------------|
+| `optimization_engine/core/base_runner.py` | Base class for runners | ❌ Not mentioned (plan only lists runner.py) |
+| `optimization_engine/core/gradient_optimizer.py` | Gradient-based optimization | ❌ Not mentioned |
+| `optimization_engine/core/runner_with_neural.py` | Neural-accelerated runner | ❌ Not mentioned |
+| `optimization_engine/core/strategy_portfolio.py` | Strategy portfolio management | ❌ Not mentioned |
+| `optimization_engine/core/strategy_selector.py` | Strategy selection (different from method_selector) | ❌ Not mentioned |
+| `optimization_engine/schemas/` | Schema files | ✅ Mentioned but directory contents not inventoried |
+
+### 1.3 Missing V1 Root-Level Files
+
+| File | Status |
+|------|--------|
+| `atomizer.py` (25KB monolith) | Listed in "DO NOT MIGRATE" ✅ but its functionality needs a replacement |
+| `launch_dashboard.py` | ❌ Not mentioned — how does V2 launch the dashboard? |
+| `requirements.txt` | Replaced by pyproject.toml ✅ |
+| `install.bat` | ❌ Not mentioned — Windows install script |
+
+### 1.4 V1 Tools Directory
+
+The plan only mentions `tools/devloop_cli.py`. V1 `tools/` has **25+ scripts** including:
+- `analyze_study.py`, `find_best_iteration.py`, `archive_study.py`
+- `create_pareto_graphs.py`, `generate_psd_figures.py`
+- Zernike-specific tools (HTML generator, WFE PSD, optical report)
+- Study migration tools
+
+**Recommendation:** Create an inventory of tools/ and decide per-file: migrate, archive, or replace.
+
+---
+
+## 2. Risk Assessment — 🟡 MAJOR
+
+### 2.1 Identified Risks (Plan Section 11)
+
+The plan's risk table is reasonable but **underestimates these risks:**
+
+| Risk | Plan's Mitigation | My Assessment |
+|------|-------------------|---------------|
+| Import breakage | Find-replace `optimization_engine.` → `atomizer.` | 🟡 **Insufficient.** Many V1 modules use relative imports, cross-module imports, and `optimization_engine.` is nested (e.g., `from optimization_engine.core.runner import Runner` where `runner.py` imports from `optimization_engine.extractors`). A mechanical find-replace will miss circular dependencies and runtime-only imports. Need a test suite, not just sed. |
+| NX integration breaks | Test on dalidou before archiving V1 | ✅ Adequate |
+| `.gitignore` too aggressive | Test essential files | 🟡 See Data Safety section below |
+
+### 2.2 Unidentified Risks
+
+| Risk | Severity | Mitigation Needed |
+|------|----------|-------------------|
+| **V1 `utils/` dependency web** — logger, trial_manager, dashboard_db are imported EVERYWHERE in V1. Where do they go in V2? | 🔴 HIGH | Create `atomizer/utils/` or distribute into appropriate modules. Map ALL import dependencies before porting. |
+| **`context/` module loss** — session state, compaction, feedback loops. If not ported, studies can't resume, context is lost between runs | 🔴 HIGH | Add to migration table, decide V2 location |
+| **`study/` module loss** — study creation wizard, continuation, reset. Without this, can't create studies from V2 | 🔴 HIGH | Add to migration table as P0 |
+| **Optuna DB path changes** — V1 studies store Optuna databases at specific paths. V2 restructure may break study continuation | 🟡 MED | Test study continuation with path remapping |
+| **NX journal path references** — NX journals may hardcode V1 paths | 🟡 MED | Audit all journal files for hardcoded paths |
+| **Knowledge base `.jsonl` files** — are these tracked in git or gitignored? They're small (212KB) but grow over time | 🟡 MED | Clarify: track in git or gitignore with backup strategy |
+| **Python version compatibility** — pyproject.toml says `>=3.10` but V1 may use patterns from 3.8/3.9 | 🟢 LOW | Test on target Python version |
+
+---
+
+## 3. Feasibility — 🟡 8-Day Timeline is Aggressive
+
+### 3.1 Phase-by-Phase Assessment
+
+| Phase | Planned | Realistic | Issue |
+|-------|---------|-----------|-------|
+| Phase 0: Bootstrap + AOM | 1 day | 1.5 days | AOM link conversion for 48 docs is tedious even with a script. Needs manual QA. |
+| Phase 1: Core Engine | 2 days | 3-4 days | **Plan lists 13 steps but misses ~25 additional files** from `core/`, `context/`, `study/`, `utils/`. Refactoring runner→engine while maintaining all runner variants (base_runner, runner_with_neural) is non-trivial. |
+| Phase 2: Supporting | 2 days | 2 days | Reasonable if scope is truly "direct port" |
+| Phase 3: Integration | 2 days | 3 days | Import fixes across 100+ files. This is where the missing modules will surface. |
+| Phase 4: Syncthing | 1 day | 1 day | Reasonable |
+| Phase 5: GitHub + CI | 1 day | 0.5 days | Straightforward |
+| Phase 6: Archive V1 | 1 day | 0.5 days | Straightforward |
+| **Total** | **8 days** | **11-13 days** | |
+
+### 3.2 Key Bottleneck
+
+**Phase 1 is underscoped.** The migration table shows 13 clean steps, but V1's `optimization_engine/` has **~150 Python files across 20 subpackages**. The plan only explicitly accounts for ~60 of these. The remaining ~90 files will surface during Phase 3 integration testing, causing scope creep and rework.
+
+**Recommendation:** Before starting, create a complete file-level inventory mapping every V1 `.py` file to its V2 destination (or explicit "skip" decision). This takes ~2 hours but saves days of surprises.
+
+---
+
+## 4. Architecture Alignment — ✅ STRONG
+
+### 4.1 AOM Component Map Match
+
+The V2 structure maps well to the AOM's four pillars:
+
+| AOM Component | V2 Location | Match |
+|--------------|-------------|-------|
+| Pillar 1 (Philosophy) | `docs/AOM/01-Philosophy/` | ✅ |
+| Pillar 2 (Operations) | `docs/AOM/02-Operations/` | ✅ |
+| Pillar 3 (Developer) | `docs/AOM/03-Developer/` | ✅ |
+| Pillar 4 (Knowledge) | `docs/AOM/04-Knowledge/` | ✅ |
+| Contracts | `atomizer/contracts/` | ✅ Matches AOM 03-Developer/08-Data-Contracts |
+| Processors | `atomizer/processors/` | ✅ Matches AOM 03-Developer/09-Processor-Development |
+| Orchestrator | `atomizer/orchestrator/` | ✅ Matches AOM 01-Philosophy/08-Tool-Agnostic |
+| Extractors | `atomizer/extractors/` | ✅ Matches AOM 02-Operations/04-Extractor-Library |
+| Protocols | `docs/protocols/` | ✅ Matches AOM 02-Operations/02-Protocol-Reference |
+
+### 4.2 Minor Misalignments
+
+| Issue | Severity |
+|-------|----------|
+| AOM has `Audit/` folder (2 docs) — plan places it under `docs/AOM/Audit/` ✅ | None |
+| AOM Phase 4/5 docs (CLAUDE-v2, Living-Document-Protocol) need explicit V2 homes — plan addresses this in Section 4.4 ✅ | None |
+| MCP servers are in V2 repo as `mcp_servers/` but AOM 03-Developer/10 suggests they could be separate repos | 🟢 Minor — decide later |
+
+---
+
+## 5. Data Safety — 🟡 NEEDS ATTENTION
+
+### 5.1 .gitignore Assessment
+
+**Good coverage for:**
+- NX/solver binary files (`.sim`, `.prt`, `.fem`, `.bdf`, `.op2`, `.f06`, `.frd`)
+- Python artifacts
+- IDE files
+- Study data directory
+
+**Missing patterns:**
+
+| Pattern | Risk | Recommendation |
+|---------|------|---------------|
+| `*.backup` / `*.bak` | Backup files could leak | Add `*.bak` and `*.backup` |
+| `*.csv` | Large result CSVs from studies | Add or use `studies/` containment |
+| `*.png` / `*.jpg` in study dirs | Iteration screenshots, contour plots | Covered by `studies/` gitignore ✅ |
+| `*.sqlite` / `*.sqlite3` | Optuna databases | Add explicitly (`.db` covers some but not all) |
+| `research_sessions/` | Knowledge base research data | Clarify if tracked |
+| `*.jsonl` | Session insights grow unbounded | Clarify: should `knowledge/session_insights/*.jsonl` be tracked? |
+| `*.whl` | Wheel files | Add |
+| `*.tar.gz` / `*.zip` | Archives in tools/ | Not currently present but preventive |
+
+### 5.2 Large File Risk
+
+The plan correctly excludes `projects/` (99GB), `atomizer_field_training_data/` (68MB), and `tools/` (462MB — wait, why is V1 tools/ 462MB?). 
+
+**Action item:** Investigate what's in V1 `tools/` that's 462MB. The plan lists it as "Large tool archives" — these could contaminate V2 if `tools/` is ported carelessly.
+
+### 5.3 Success Criterion #9
+
+> "No file larger than 1MB in git history (excluding initial dashboard assets)"
+
+This is good but needs enforcement. **Recommendation:** Add a pre-commit hook or CI check that rejects files >1MB.
+
+---
+
+## 6. Backward Compatibility — 🟡 RISKS EXIST
+
+### 6.1 AtomizerSpec v2→v3 Migration
+
+The plan mentions `atomizer/spec/migrator.py` for v2.0→v3.0 migration. This is critical.
+
+**Key question:** What happens when a V1 `atomizer_spec.json` is loaded?
+- V1 specs have no `toolchain` section → must default to `NX/NX mesher/Nastran`
+- V1 specs use `optimization_engine.*` import paths in custom hooks → must still work
+- V1 specs may reference absolute paths on dalidou → need path translation
+
+### 6.2 V1 Study Continuation
+
+Can a V2 installation continue an in-progress V1 study?
+- Optuna DB: needs same database path or migration
+- Study state: `optimization_engine/study/state.py` tracks progress — needs porting
+- Iteration results: stored in `studies/*/` — path-dependent
+
+**The plan doesn't address mid-study migration.** This may be acceptable if all V1 studies are completed before migration, but this should be an explicit decision.
+
+### 6.3 Import Path Compatibility
+
+The plan says "find-replace `optimization_engine.` → `atomizer.`" but:
+- V1 custom hooks may import from `optimization_engine.*`
+- User-created study scripts import V1 paths
+- NX journals may import from V1 paths
+
+**Recommendation:** Consider a compatibility shim:
+```python
+# optimization_engine/__init__.py (temporary)
+import warnings
+warnings.warn("optimization_engine is deprecated, use atomizer", DeprecationWarning)
+from atomizer import *
+```
+
+---
+
+## 7. Gaps — What Hasn't Been Considered
+
+### 7.1 🔴 No Rollback Plan
+If V2 migration fails at Phase 3, what's the recovery? V1 is still there (not archived until Phase 6), but there's no documented rollback procedure.
+
+### 7.2 🟡 No Migration Verification Checklist
+The "Success Criteria" (Section 13) are end-state checks. There's no per-phase verification that catches issues early. Each phase needs explicit "done when" criteria with test commands.
+
+### 7.3 🟡 Environment/Dependencies
+- V1 uses `requirements.txt` + conda (`atomizer` env). V2 uses `pyproject.toml`.
+- How are V1 dependencies captured? Is there a `pip freeze` of the working V1 environment?
+- PyTorch + torch-geometric (for GNN) are notoriously version-sensitive. Pin versions.
+
+### 7.4 🟡 Windows Path Handling
+V1 was developed on Windows (NX is Windows-only). V2 development is on Linux. Cross-platform path handling (`pathlib.Path` vs string paths) needs systematic review, not just "update Windows paths in NX processor (if needed)."
+
+### 7.5 🟢 Documentation for `config/` Migration
+V1 has `config/nx_config.json.template` and `config/optimization_config_template.json`. These aren't mentioned in the migration plan. They should either map to V2's `atomizer/spec/` or `.env.example`.
+
+### 7.6 🟢 `optimization_engine/schemas/` Contents
+The plan says "Port schemas" but doesn't inventory what's in this directory. Should be checked.
+
+### 7.7 🟢 Feature Registry
+V1 has `optimization_engine/feature_registry.json`. Not mentioned in migration plan.
+
+---
+
+## Summary Scorecard
+
+| Criteria | Grade | Notes |
+|----------|-------|-------|
+| **Completeness** | 🟡 C+ | ~60% of V1 files explicitly mapped. 8+ subpackages missing. |
+| **Risk Assessment** | 🟡 B- | Good risks identified, but `utils/`, `context/`, `study/` omissions are high-risk |
+| **Feasibility** | 🟡 B- | 8 days → realistically 11-13 days |
+| **Architecture Alignment** | ✅ A | Excellent match to AOM Component Map |
+| **Data Safety** | 🟡 B | Solid .gitignore but missing some patterns; needs pre-commit hook |
+| **Backward Compatibility** | 🟡 B- | Spec migration planned but mid-study and import shims not addressed |
+| **Overall** | 🟡 B- | Strong vision, solid architecture, but execution plan has dangerous gaps in file inventory |
+
+---
+
+## Recommendations (Priority Ordered)
+
+1. **🔴 IMMEDIATE: Create complete file inventory** — Map every V1 `.py` file to V2 destination or explicit skip. ~2 hours, saves days. (`find optimization_engine -name "*.py" | sort` → spreadsheet with V2 destination column)
+
+2. **🔴 Add missing modules to migration table:**
+   - `context/` → `atomizer/context/` or merge into `optimization/`
+   - `study/` → `atomizer/study/` (this is P0, not optional)
+   - `utils/` → `atomizer/utils/` (infrastructure everything depends on)
+   - `plugins/` → merge with `hooks/` or separate
+   - `validation/` → merge with `spec/validator.py`
+   - `intake/` → `atomizer/intake/` or merge into `interview/`
+
+3. **🟡 Extend timeline to 12 days** or explicitly reduce scope (e.g., "Phase 1 ports only the minimum for NX workflow; remaining modules in Phase 2")
+
+4. **🟡 Add per-phase verification commands** (not just end-state criteria)
+
+5. **🟡 Add rollback procedure** to Section 11
+
+6. **🟡 Pin dependency versions** in pyproject.toml (especially PyTorch, torch-geometric)
+
+7. **🟡 Add pre-commit hook** for file size enforcement (>1MB rejection)
+
+8. **🟢 Consider import compatibility shim** for transition period
+
+9. **🟢 Investigate V1 `tools/` size** (462MB — what's in there?)
+
+10. **🟢 Decide on `.jsonl` tracking** — knowledge base files should probably be tracked, session data should not
+
+---
+
+*This is a strong plan with the right vision and principles. The architecture alignment is excellent. The gaps are execution-level — they're fixable before work begins. Fixing them now prevents the "oh wait, where does this module go?" problem that derails migrations mid-stream.*
+
+*— Auditor 🔍, 2026-02-22*
diff --git a/hq/workspaces/shared/reviews/v2-migration-code-review.md b/hq/workspaces/shared/reviews/v2-migration-code-review.md
new file mode 100644
index 00000000..a328f9f5
--- /dev/null
+++ b/hq/workspaces/shared/reviews/v2-migration-code-review.md
@@ -0,0 +1,255 @@
+TASK: V2 Migration Code-Focused Review
+STATUS: complete
+CONFIDENCE: high
+
+---
+
+# V2 Migration Master Plan — Code-Focused Review
+
+**Reviewer:** Technical Lead
+**Date:** 2026-02-22
+**Reviewed:** ATOMIZER-V2-MIGRATION-MASTERPLAN-V2.md (audit-fixed, ~71KB)
+**Cross-referenced:** V1 codebase at `/home/papa/repos/Atomizer/optimization_engine/`
+
+---
+
+## 1. V2 Package Architecture
+
+**Verdict: Good structure, two concerns.**
+
+The `atomizer/` package layout is clean and well-organized. Module boundaries are logical. The rename from `optimization_engine/` to `atomizer/` with semantic subpackages (`optimization/`, `processors/`, `contracts/`, etc.) is an improvement.
+
+### Circular Dependency Risk — LOW
+
+Actual V1 cross-module imports are well-layered:
+- `core/` → `nx/`: ✅ (runner imports NXSolver, model_cleanup)
+- `processors/surrogates/` → `nx/`: ✅ (generic_surrogate imports NXSolver)
+- `nx/` → `core/`: ❌ None found — clean dependency direction
+
+The V2 structure preserves this. The one concern is the **dual placement of surrogates**:
+- `atomizer/processors/surrogates/` (9 files — the training/inference surrogates)
+- `atomizer/optimization/surrogates/` (5 files — GNN-based surrogates from `gnn/`)
+
+This split is confusing. In V1, `gnn/` imports from `extractors` and `nx.solver`, while `processors/surrogates/` also imports from `extractors` and `nx.solver`. They're functionally similar but architecturally separate. **Recommend: document the distinction clearly in `__init__.py` docstrings, or consolidate into one `atomizer/surrogates/` package.**
+
+### `contracts/` Positioning
+
+Placing `contracts/` inside `atomizer/` is correct — it should be importable by all other modules. No circular risk since contracts should be leaf nodes (no imports from other atomizer modules).
+
+---
+
+## 2. Import Graph Analysis
+
+**212 Python files in V1.** Ran full import analysis.
+
+### Key Findings
+
+**V1 uses heavy lazy imports.** Many cross-module imports are inside functions (e.g., `from optimization_engine.nx.solver import NXSolver` inside method bodies in `core/base_runner.py`, `intake/processor.py`, `validation/gate.py`, `processors/surrogates/generic_surrogate.py`). This is good — it means the actual import graph at module load time is lighter than it appears, and V2's restructuring won't cause import-time failures for optional dependencies.
+
+**The `extractors/__init__.py` is a mega-importer** — it imports from 14 submodules. In V2, this should be preserved but it means `from atomizer.extractors import *` will pull in a lot. Not a problem, just be aware.
+
+**`future/` imports cross into production code:**
+- `config/capability_matcher.py` imports from `future.workflow_decomposer`
+- `config/setup_wizard.py` imports from `extractor_orchestrator` and `inline_code_generator` (which live in `future/`)
+
+⚠️ **This is a problem.** The plan says `future/` is "DO NOT MIGRATE," but `config/` (migrating as `atomizer/spec/`) has runtime imports from `future/`. Either:
+1. Port the specific `future/` files that `config/` depends on (`workflow_decomposer.py`, at minimum)
+2. Or stub them out in V2's `spec/capability_matcher.py` and `spec/setup_wizard.py`
+
+**Recommendation:** Check if these are behind try/except or conditional imports. If they're hard imports, this will break.
+
+---
+
+## 3. File Inventory Accuracy
+
+**Plan claims ~168 files. Actual count: 212.**
+
+The 44-file discrepancy breaks down:
+- `devloop/`: 8 files (plan says 7)
+- `future/`: 11 files (plan counts correctly but skips them)
+- Test files scattered in modules: `extractors/test_phase3_extractors.py`, `gnn/test_*.py` (3), `hooks/test_*.py` (2)
+- `__init__.py` files across 35 directories
+
+**Module-level spot-check:**
+
+| Module | Plan Count | Actual Count | Match? |
+|--------|-----------|-------------|--------|
+| core/ | 9 | 9 | ✅ |
+| extractors/ | 28 | 28 | ✅ |
+| gnn/ | 11 | 11 | ✅ |
+| plugins/ | 22 | 21 | ⚠️ Off by 1 |
+| processors/ | 12 | 13 | ⚠️ Off by 1 |
+| hooks/ | 12 | 12 | ✅ |
+| nx/ | 10 | 10 | ✅ |
+| context/ | 7→8 | 8 | ⚠️ Plan says 7 in §3.2 |
+| config/ | 9 | 9 | ✅ |
+| interview/ | 7→8 | 8 | ⚠️ Plan says 7 in §3.12 |
+
+The discrepancies are minor (likely `__init__.py` counting inconsistencies). **The inventory is substantially accurate.** The 168 vs 212 gap is mostly `future/` + `devloop/` + scattered test files + `__init__.py` files, all of which are accounted for in disposition.
+
+---
+
+## 4. Data Contracts
+
+**Verdict: Feasible but requires significant refactoring.**
+
+The plan introduces `atomizer/contracts/` with `AtomizerGeometry`, `AtomizerMesh`, `AtomizerBCs`, `AtomizerResults`, `AtomizerMaterial`.
+
+**V1 has NO unified data model.** Data flows through:
+- Raw dictionaries (spec configs parsed from JSON)
+- `pyNastran` BDF/OP2 objects (mesh/results)
+- NX `.prt` binary files (geometry, parsed via `NXParameterUpdater`)
+- NX `.exp` files (expression format)
+- Optuna trial objects
+- Custom dataclass-like objects in `spec_models.py`
+
+The contracts are **aspirational, not extractive** — they don't map to existing V1 structures. This is fine as a V2 goal, but **they should be P1, not P0.** The P0 migration can work without contracts by keeping the existing data flow patterns. Trying to introduce contracts simultaneously with the migration adds unnecessary risk.
+
+**Recommendation:** Make `contracts/` a Phase 2 or later concern. Get the codebase ported first, then introduce contracts as an internal refactor.
+
+---
+
+## 5. Processor Pattern (NX Wrapping)
+
+**Verdict: The plan wisely abandoned the aggressive wrapping approach.**
+
+The audit-revised plan keeps `atomizer/nx/` as a **direct port** of V1's `optimization_engine/nx/` (10 files, same structure). This is the right call.
+
+**Why wrapping would be hard:** `NXSolver` doesn't use NXOpen API directly — it shells out to NX Nastran via `subprocess`. The NX coupling is:
+- File-system based (`.sim`, `.prt`, `.fem` files)
+- Path-dependent (NX install directory auto-detection)
+- Session-managed (`NXSessionManager` for concurrent access)
+- Iteration-folder based (HEEDS-style model copies)
+
+The `hooks/nx_cad/` modules ARE tightly coupled to NXOpen (`import NXOpen`, `NXOpen.Session.GetSession()`, etc.) — these are NX journal scripts meant to run inside the NX process. They can't be abstracted.
+
+**The plan's `processors/geometry/nx_geometry.py` and `processors/meshing/nx_mesher.py` and `processors/solvers/nastran_solver.py`** appear in the tree but have no V1 source. These are NEW files that would wrap `atomizer/nx/`. This is fine as future work but **should not block migration.**
+
+---
+
+## 6. `utils/` Dependency Web
+
+**Result: Only 11 cross-module imports from `utils/`. This is NOT a crisis.**
+
+Breakdown:
+- `utils.logger.get_logger`: 4 imports (core, study, processors)
+- `utils.codebase_analyzer`: 2 imports (config, future)
+- `utils.realtime_tracking`: 1 import (core)
+- `utils.trial_manager`: 1 import (self-reference)
+- `utils.nx_file_discovery`: 1 import (self-reference)
+- `utils.dashboard_db`: 1 import (self-reference)
+- `utils.require_nx_or_exit`: 1 import (self-reference)
+
+The audit's concern about `utils/` being "imported everywhere" was overstated. **`logger.py` is the only truly cross-cutting utility.** The rest are module-specific.
+
+**Recommendation:** `utils/` port order is correct (Phase 1, before core). No special handling needed. Consider whether `nx_file_discovery.py` and `nx_session_manager.py` belong in `atomizer/nx/` rather than `atomizer/utils/` — they're NX-specific.
+
+---
+
+## 7. Test Strategy
+
+**V1 `tests/` lives at `/home/papa/repos/Atomizer/tests/` (repo root), NOT inside `optimization_engine/`.** The plan's "11MB tests" claim couldn't be verified at the `optimization_engine/tests/` path (doesn't exist).
+
+Actual test files found at repo root `tests/`:
+- ~20 Python test files
+- Mix of unit tests (`tests/unit/`) and integration tests
+- Topics: context engineering, zernike, hooks, beam workflow, surrogate training, phase 3 integration
+- Several inline test files inside modules: `extractors/test_phase3_extractors.py`, `gnn/test_*.py` (3 files), `hooks/test_*.py` (2 files)
+
+**Portability:** The unit tests in `tests/unit/` (surrogate training, adaptive characterization, neural surrogate) are portable — they test pure Python logic. Integration tests (NX workflows, beam optimization) need the NX environment and aren't portable without the solver.
+
+**Recommendation:** Port `tests/unit/` tests first. Integration tests wait for Phase 4 (dalidou testing).
+
+---
+
+## 8. Pythonic Quality — `pyproject.toml`
+
+**Issues found:**
+
+1. **Build backend is wrong:**
+   ```toml
+   build-backend = "setuptools.backends._legacy:_Backend"
+   ```
+   This is an internal/undocumented API. Should be:
+   ```toml
+   build-backend = "setuptools.build_meta"
+   ```
+
+2. **`numpy>=1.24,<2.0` is too restrictive.** NumPy 2.0 has been out since June 2024. Many dependencies (scipy, pandas) now require or prefer NumPy 2.x. Change to `numpy>=1.24` or `numpy>=1.26,<3.0`.
+
+3. **Missing `[project.scripts]` entry point.** The CLI (`atomizer/cli/main.py`) should have:
+   ```toml
+   [project.scripts]
+   atomizer = "atomizer.cli.main:main"
+   ```
+
+4. **`pyNastran` in `[nx]` optional group** — pyNastran is used by extractors (OP2 reading), not just NX. It should probably be a core dependency or in a `nastran` group, not `nx`.
+
+5. **`click` is listed as core dependency** but the CLI is P2 priority. Should be in `[project.optional-dependencies.cli]` or accepted as core.
+
+6. **Missing `[tool.setuptools.packages]`:**
+   ```toml
+   [tool.setuptools.packages.find]
+   include = ["atomizer*"]
+   ```
+   Without this, setuptools might not find the package.
+
+---
+
+## RESULT: Summary of Findings
+
+### 🟢 GREEN (Will Work)
+- Module boundary design is clean
+- Import graph is well-layered, no circular dependency risk
+- File inventory is substantially accurate (minor counting discrepancies)
+- `utils/` dependency web is manageable (11 imports, not a crisis)
+- NX module direct-port approach is correct
+- Lazy import pattern in V1 makes restructuring safer
+
+### 🟡 YELLOW (Needs Attention Before Execution)
+- **`future/` dependency from `config/`** — `capability_matcher.py` and `setup_wizard.py` import from `future/` which is marked "DO NOT MIGRATE". Must resolve.
+- **`pyproject.toml` build backend is wrong** — `setuptools.backends._legacy:_Backend` → `setuptools.build_meta`
+- **NumPy upper bound too restrictive** — `<2.0` blocks modern NumPy
+- **Missing `[project.scripts]` and `[tool.setuptools.packages.find]`**
+- **Dual surrogates placement** — `processors/surrogates/` and `optimization/surrogates/` needs clearer documentation or consolidation
+- **`nx_file_discovery.py` and `nx_session_manager.py`** belong in `atomizer/nx/`, not `atomizer/utils/`
+
+### 🔴 RED (Risk)
+- **`contracts/` at P0 is premature** — V1 has no unified data model. Introducing contracts during migration adds risk. Recommend P1/P2.
+- **Test path confusion** — plan references `optimization_engine/tests/` which doesn't exist. Tests are at repo root. Test strategy needs correction.
+
+---
+
+## NOTES: Specific Code-Level Recommendations
+
+1. **Fix `pyproject.toml` before Phase 0:**
+   - `build-backend = "setuptools.build_meta"`
+   - Add `[tool.setuptools.packages.find]` with `include = ["atomizer*"]`
+   - Add `[project.scripts]` entry point
+   - Change numpy to `>=1.24` (remove `<2.0`)
+
+2. **Resolve `future/` dependency in Phase 1:**
+   - Run: `grep -n "from optimization_engine.future" /home/papa/repos/Atomizer/optimization_engine/config/*.py`
+   - If hard imports: port `workflow_decomposer.py` (and its `WorkflowStep` class)
+   - If conditional: add try/except stubs
+
+3. **Move NX-specific utils during port:**
+   - `utils/nx_file_discovery.py` → `atomizer/nx/file_discovery.py`
+   - `utils/nx_session_manager.py` → `atomizer/nx/session_manager.py` (note: there's ALSO `nx/session_manager.py` — check for duplication)
+
+4. **Defer `contracts/` to post-migration refactor.** Keep `atomizer/contracts/` in the tree as empty stubs with docstrings, but don't force V1 code through them during migration.
+
+5. **Phase 3 import fix script should be automated:**
+   ```bash
+   find atomizer/ -name "*.py" -exec sed -i 's/from optimization_engine\./from atomizer./g' {} +
+   # Then manual fixups for renamed modules (core.runner → optimization.engine, etc.)
+   ```
+
+6. **Add a `make check-imports` target** that runs:
+   ```bash
+   python -c "import atomizer" && grep -r "optimization_engine\." atomizer/ --include="*.py" | grep -v _compat
+   ```
+
+**Overall Assessment: The migration plan is solid and will work.** The architecture is well-thought-out, the file inventory is thorough, and the phasing is correct. The issues identified above are all fixable before or during execution. The biggest risk is scope creep from trying to introduce new abstractions (`contracts/`, processor wrappers) simultaneously with the port.
+
+**Confidence: HIGH** — This plan, with the fixes noted, will produce a working V2.
diff --git a/hq/workspaces/shared/taskboard.json b/hq/workspaces/shared/taskboard.json
index 8b013334..76c848c0 100644
--- a/hq/workspaces/shared/taskboard.json
+++ b/hq/workspaces/shared/taskboard.json
@@ -1,6 +1,6 @@
 {
   "version": 1,
-  "lastUpdated": "2026-02-19T14:53:13Z",
+  "lastUpdated": "2026-02-22T15:33:18Z",
   "updatedBy": "webster",
   "tasks": [
     {
@@ -18,14 +18,15 @@
         "format": ""
       },
       "created": "2026-02-17T01:41:59Z",
-      "updated": "2026-02-19T14:53:13Z",
+      "updated": "2026-02-22T15:33:18Z",
       "dueBy": null,
       "notes": [
         "[2026-02-17 01:42] [webster] Started research",
         "[2026-02-17 01:42] [webster] Posted to #technical",
         "[2026-02-17 01:42] [manager] Deliverable accepted — melting point data posted to #technical",
         "[2026-02-19 14:52] [webster] Started research",
-        "[2026-02-19 14:53] [webster] Blocked: web_search tool is missing API key. See Slack DM."
+        "[2026-02-19 14:53] [webster] Blocked: web_search tool is missing API key. See Slack DM.",
+        "[2026-02-22 15:33] [webster] Blocked: web_search tool is failing (missing API key)."
       ],
       "completedAt": "2026-02-17T01:42:54Z"
     },