From 2026572d917e11c2f0c2ff1f13108ec0f7dcaf15 Mon Sep 17 00:00:00 2001 From: Antoine Date: Tue, 24 Feb 2026 10:00:18 +0000 Subject: [PATCH] chore(hq): daily sync 2026-02-24 --- hq/.gitignore | 49 +- hq/README.md | 86 ++-- hq/scripts/sync-aom-to-obsidian.sh | 57 +++ hq/workspaces/auditor/AGENTS.md | 12 + hq/workspaces/manager/MEMORY.md | 2 + hq/workspaces/manager/memory/2026-02-24.md | 32 ++ hq/workspaces/nx-expert/AGENTS.md | 12 + hq/workspaces/optimizer/AGENTS.md | 12 + hq/workspaces/secretary/AGENTS.md | 12 + hq/workspaces/shared/DISCORD-RULES.md | 30 ++ hq/workspaces/shared/PROJECT_STATUS.md | 32 +- .../reviews/v2-migration-coherence-audit.md | 417 ++++++++++++++++++ .../reviews/v2-migration-preflight-fixes.md | 178 ++++++++ hq/workspaces/study-builder/AGENTS.md | 12 + hq/workspaces/technical-lead/AGENTS.md | 12 + hq/workspaces/webster/AGENTS.md | 12 + hq/workspaces/webster/IDENTITY.md | 24 +- 17 files changed, 919 insertions(+), 72 deletions(-) create mode 100755 hq/scripts/sync-aom-to-obsidian.sh create mode 100644 hq/workspaces/manager/memory/2026-02-24.md create mode 100644 hq/workspaces/shared/DISCORD-RULES.md create mode 100644 hq/workspaces/shared/reviews/v2-migration-coherence-audit.md create mode 100644 hq/workspaces/shared/reviews/v2-migration-preflight-fixes.md diff --git a/hq/.gitignore b/hq/.gitignore index 31cff5ed..75ddc852 100644 --- a/hq/.gitignore +++ b/hq/.gitignore @@ -1,11 +1,54 @@ +# Secrets .env -*.log +.env.* +config/*.env +config/.discord-tokens.env +config/shared-credentials.json + +# Python +__pycache__/ +*.py[cod] +*.so +.venv/ +venv/ + +# Node +node_modules/ +package-lock.json + +# Job queue data (ephemeral) job-queue/inbox/* job-queue/outbox/* job-queue/archive/* !job-queue/*/.gitkeep + +# Tool venvs +tools/nxopen-mcp/.venv/ + +# Dashboard deps + build +dashboard/frontend/node_modules/ +dashboard/frontend/dist/ +dashboard/venv/ + +# Bridge deps +bridge/node_modules/ discord-bridge/node_modules/ + +# Instances instances/*/browser/ -bridge/node_modules/ -node_modules/ +# Logs (ephemeral) +logs/ +*.log + +# Handoffs (ephemeral orchestration data) +handoffs/ + +# OS +.DS_Store +Thumbs.db + +# Legacy deliverables +deliverables/ +tools/nxopen-mcp/ +dashboard/ diff --git a/hq/README.md b/hq/README.md index 54f682fa..3e940312 100644 --- a/hq/README.md +++ b/hq/README.md @@ -1,45 +1,63 @@ -# Atomizer Engineering Co. +# Atomizer-HQ 🎯 -AI-powered FEA optimization company running on Clawdbot multi-agent. +> The AI operations team that builds, tests, improves, and operates [Atomizer](http://192.168.86.50:3000/Antoine/Atomizer-V2). -## Quick Start +## What is HQ? -1. Install Docker: `sudo apt install docker.io docker-compose-v2 -y` -2. Copy `.env.template` β†’ `.env` and fill in tokens -3. Build image: `docker build -t clawdbot:local .` (from Clawdbot repo) -4. Start: `docker compose up -d` -5. Check logs: `docker compose logs -f atomizer-gateway` +**Atomizer** = the product (optimization framework, code, AOM docs) +**Atomizer-HQ** = the AI team that operates it (agent workspaces, memory, skills, orchestration) + +Think of it as: Atomizer is the race car, HQ is the pit crew. ## Structure ``` -atomizer/ -β”œβ”€β”€ docker-compose.yml # Docker Compose config -β”œβ”€β”€ .env.template # Environment template (copy to .env) -β”œβ”€β”€ config/ -β”‚ └── clawdbot.json # Gateway config (multi-agent) -β”œβ”€β”€ workspaces/ -β”‚ β”œβ”€β”€ manager/ # 🎯 Manager agent workspace -β”‚ β”œβ”€β”€ secretary/ # πŸ“‹ Secretary agent workspace -β”‚ └── technical-lead/ # πŸ”§ Technical Lead agent workspace -β”œβ”€β”€ skills/ -β”‚ β”œβ”€β”€ atomizer-company/ # Company identity skill -β”‚ └── atomizer-protocols/ # Engineering protocols skill -β”œβ”€β”€ job-queue/ -β”‚ β”œβ”€β”€ inbox/ # Results from Windows β†’ agents -β”‚ β”œβ”€β”€ outbox/ # Job files from agents β†’ Windows -β”‚ └── archive/ # Processed jobs -└── shared/ # Shared resources (read-only) +atomizer-hq/ +β”œβ”€β”€ workspaces/ # Agent workspaces (SOUL.md, IDENTITY.md, MEMORY.md, etc.) +β”‚ β”œβ”€β”€ manager/ # 🎯 Engineering Manager / Orchestrator +β”‚ β”œβ”€β”€ secretary/ # πŸ“‹ CEO Interface, Admin +β”‚ β”œβ”€β”€ technical-lead/ # πŸ”§ FEA Expert, R&D Lead +β”‚ β”œβ”€β”€ optimizer/ # ⚑ Algorithm Specialist +β”‚ β”œβ”€β”€ study-builder/ # πŸ—οΈ Study Code Engineer +β”‚ β”œβ”€β”€ auditor/ # πŸ” Quality Gatekeeper +β”‚ β”œβ”€β”€ webster/ # 🌐 Web Research +β”‚ └── nx-expert/ # πŸ–₯️ NX/Simcenter Specialist +β”œβ”€β”€ skills/ # HQ-specific agent skills +β”‚ β”œβ”€β”€ atomizer-company/ # Company identity +β”‚ └── atomizer-protocols/ # Engineering protocols +β”œβ”€β”€ shared/ # Shared resources (tools, skills, windows helpers) +β”œβ”€β”€ hq/ # HQ operational data (taskboard, condensations) +β”œβ”€β”€ mission-control/ # Mission dashboard (web UI) +β”œβ”€β”€ scripts/ # Automation scripts +β”œβ”€β”€ tools/ # MCP servers, utilities +β”œβ”€β”€ config/ # Gateway config (secrets excluded) +β”œβ”€β”€ CHANNELS.md # Slack channel mapping +└── docker-compose.yml # Legacy Docker config ``` -## Agents (Phase 0) +## Agents -| Agent | Emoji | Channel | Model | -|-------|-------|---------|-------| -| Manager | 🎯 | #hq | Opus 4.6 | -| Secretary | πŸ“‹ | #secretary | Opus 4.6 | -| Technical Lead | πŸ”§ | (delegated) | Opus 4.6 | +| Agent | Emoji | Model | Status | +|-------|-------|-------|--------| +| Manager | 🎯 | Opus 4.6 | Active | +| Secretary | πŸ“‹ | Opus 4.6 | Active | +| Technical Lead | πŸ”§ | Opus 4.6 | Active | +| Optimizer | ⚑ | Opus 4.6 | Active | +| Study Builder | πŸ—οΈ | Opus 4.6 | Active | +| Auditor | πŸ” | Opus 4.6 | Active | +| Webster | 🌐 | Opus 4.6 | Active | +| NX Expert | πŸ–₯️ | Opus 4.6 | Phase 2 | -## Ports -- Mario (existing): 18789 (systemd) -- Atomizer (new): 18790 β†’ 18789 (Docker) +## Key Decisions + +- **DEC-037**: Atomizer and HQ are separate entities (2026-02-23) +- HQ repo: `192.168.86.50:3000/Antoine/Atomizer-HQ` +- Atomizer V2 repo: `192.168.86.50:3000/Antoine/Atomizer-V2` +- HQ follows AOM as its operating manual, but HQ configs live here + +## Infrastructure + +- **Host:** T420 (clawdbot) +- **Platform:** OpenClaw multi-agent gateway +- **Channels:** Dedicated Slack workspace +- **CEO:** Antoine Letarte diff --git a/hq/scripts/sync-aom-to-obsidian.sh b/hq/scripts/sync-aom-to-obsidian.sh new file mode 100755 index 00000000..6a99ba73 --- /dev/null +++ b/hq/scripts/sync-aom-to-obsidian.sh @@ -0,0 +1,57 @@ +#!/usr/bin/env bash +# sync-aom-to-obsidian.sh +# Syncs Atomizer V2 docs/AOM/ β†’ Obsidian vault (with markdownβ†’wiki-link conversion) +# Direction: Repo (source of truth) β†’ Obsidian (read target for iPad/SeaDrive) +# Per DEC-036: one-way sync, repo wins. + +set -euo pipefail + +REPO_AOM="/home/papa/repos/Atomizer-V2/docs/AOM" +OBSIDIAN_AOM="/home/papa/obsidian-vault/2-Projects/P-Atomizer-Operating-Manual" +LOG="/home/papa/atomizer/logs/aom-sync.log" + +mkdir -p "$(dirname "$LOG")" + +# Check source exists +if [ ! -d "$REPO_AOM" ]; then + echo "$(date -Iseconds) ERROR: Source not found: $REPO_AOM" >> "$LOG" + exit 1 +fi + +# Sync files (delete extras in target that aren't in source) +# --exclude .obsidian to preserve any Obsidian workspace settings +rsync -av --delete \ + --exclude '.obsidian/' \ + --exclude '.trash/' \ + "$REPO_AOM/" "$OBSIDIAN_AOM/" 2>&1 | tail -5 >> "$LOG" + +# Convert standard markdown links back to Obsidian wiki-links +# Pattern: [Display Text](./path/to/file.md) β†’ [[path/to/file|Display Text]] +# Pattern: [filename](./filename.md) β†’ [[filename]] +find "$OBSIDIAN_AOM" -name "*.md" -type f | while read -r file; do + # Convert [text](relative/path.md#heading) β†’ [[relative/path#heading|text]] + perl -i -pe ' + # [Text](./file.md#heading) β†’ [[file#heading|Text]] + s/\[([^\]]+)\]\(\.\/([\w\/-]+)\.md(#[^\)]+)?\)/ + my ($text, $path, $heading) = ($1, $2, $3 || ""); + my $target = $path . $heading; + # If display text matches filename, simplify + my $basename = $path; $basename =~ s|.*\/||; + ($text eq $basename) ? "[[$target]]" : "[[$target|$text]]" + /ge; + # [Text](path.md) without ./ prefix + s/\[([^\]]+)\]\(([\w\/-]+)\.md(#[^\)]+)?\)/ + my ($text, $path, $heading) = ($1, $2, $3 || ""); + my $target = $path . $heading; + my $basename = $path; $basename =~ s|.*\/||; + ($text eq $basename) ? "[[$target]]" : "[[$target|$text]]" + /ge; + ' "$file" +done + +# Handle the README.md β†’ MAP rename for Obsidian navigation +if [ -f "$OBSIDIAN_AOM/README.md" ] && [ ! -f "$OBSIDIAN_AOM/MAP - Atomizer Operating Manual.md" ]; then + cp "$OBSIDIAN_AOM/README.md" "$OBSIDIAN_AOM/MAP - Atomizer Operating Manual.md" +fi + +echo "$(date -Iseconds) OK: Synced $(find "$OBSIDIAN_AOM" -name '*.md' | wc -l) docs" >> "$LOG" diff --git a/hq/workspaces/auditor/AGENTS.md b/hq/workspaces/auditor/AGENTS.md index 491f7744..910e134b 100644 --- a/hq/workspaces/auditor/AGENTS.md +++ b/hq/workspaces/auditor/AGENTS.md @@ -84,3 +84,15 @@ When working on a task: - Always append progress to `shared/project_log.md` See `shared/skills/taskboard/SKILL.md` for full documentation. + + +## Discord Posting Rules (MANDATORY β€” READ EVERY SESSION) +Read and follow: `/home/papa/atomizer/workspaces/shared/DISCORD-RULES.md` + +**CRITICAL RULES:** +1. You CAN see other agents' Discord posts β€” use them for context +2. You MUST NOT respond to other agents' posts unless you were directly @mentioned/named +3. You MUST NOT post social chatter ("great work", "looking forward to...", "πŸ‘", acknowledgments) +4. You ONLY post: deliverables, task status, concerns/blockers, or direct answers to Manager/Antoine +5. Before any Discord post, ask: "Does Antoine need to see this?" β€” if NO, respond NO_REPLY +6. Every unnecessary post wastes CEO's API budget β€” silence is the default diff --git a/hq/workspaces/manager/MEMORY.md b/hq/workspaces/manager/MEMORY.md index da8bcbc7..91c68d60 100644 --- a/hq/workspaces/manager/MEMORY.md +++ b/hq/workspaces/manager/MEMORY.md @@ -28,6 +28,8 @@ Read these on first session to fully understand the vision and architecture. - **Hydrotech Beam** β€” Channel: `#project-hydrotech-beam` | Phase: DOE Phase 1 complete (39/51 solved, mass NaN fixed via commit 580ed65, displacement constraint relaxed 10β†’20mm). Next: pull fix on dalidou, rerun DOE. **Blocked on Antoine running updated code on dalidou.** - **Adaptive Isogrid Plate Lightweighting** β€” Channel: war-room-isogrid | Phase: Technical spec locked + reviews complete. Full spec (32KB) + optimizer/tech-lead/webster reviews in `shared/war-room-isogrid/`. Architecture: "Python Brain + NX Hands + Atomizer Manager". Next: CEO review β†’ implementation planning. - **Atomizer Project Standard** β€” Phase: Full review package delivered (2026-02-18). Spec (~57KB), tech-lead review, auditor audit, secretary synthesis all complete. Files in `shared/standardization/`. **Auditor verdict: spec is over-engineered β€” recommends Minimum Viable Standard (MVS) based on Hydrotech Beam's existing structure.** Awaiting CEO decision: adopt full spec vs MVS approach. Next: Antoine review β†’ decision β†’ implementation. +- **Atomizer V2 Migration** β€” Phase: COMPLETE (2026-02-23). 8 commits pushed to Gitea. 218+ Python files, 58 tests passing. All phases done: repo bootstrap, core engine port, integration testing, reference implementation, CLAUDE.md, Data Contracts (5 dataclasses), Pipeline-NX integration tests, roadmap for items 4-9. Dalidou validated: `import atomizer` v2.0.0 + 24/24 tests on Windows. V1 tagged `v1-final` but kept active for Antoine's current optimizations. AOMβ†’Obsidian auto-sync via crontab (15min rsync + wiki-link conversion). Phase 6 (archive V1) deferred until Antoine switches production work. +- **Atomizer/HQ Separation** β€” CEO decision (2026-02-23): Atomizer = product (V2 repo), HQ = AI operations team (HQ repo). AOM governs the product. 7 AOM docs updated to reflect boundary. DEC-037 logged. HQ repo pushed to Gitea with full operational structure (218 files). ## Core Protocols - **OP_11 β€” Digestion Protocol** (CEO-approved 2026-02-11): STORE β†’ DISCARD β†’ SORT β†’ REPAIR β†’ EVOLVE β†’ SELF-DOCUMENT. Runs at phase completion, weekly heartbeat, and project close. Antoine's corrections are ground truth. diff --git a/hq/workspaces/manager/memory/2026-02-24.md b/hq/workspaces/manager/memory/2026-02-24.md new file mode 100644 index 00000000..444ddb0e --- /dev/null +++ b/hq/workspaces/manager/memory/2026-02-24.md @@ -0,0 +1,32 @@ +# 2026-02-24 + +## Nightly Digestion β€” OP_11 (Incremental) + +### STORE +- V2 Migration marked COMPLETE in MEMORY.md (already done Feb 23). Coherence audit (conditional pass) + preflight fixes (3 critical issues resolved) captured in `shared/reviews/`. HQ Separation complete (DEC-037). +- No new CEO corrections to process. +- No new project activity since Feb 23 afternoon β€” team quiet (weekend/waiting on CEO decisions). + +### DISCARD +- Memory files Feb 8 + Feb 9 are 16 days old β€” within 30-day retention, no pruning needed yet. +- No contradictions found. MEMORY.md Active Projects section is current and accurate. +- Sub-agent spawning blocker from Feb 22: appeared to self-resolve (auditor spawned successfully that same day). Downgrading from blocker to intermittent issue. + +### SORT +- Coherence audit + preflight fixes correctly placed in `shared/reviews/` (project-level). +- No session-level patterns to promote. + +### REPAIR +- **PROJECT_STATUS.md was stale** β€” still showed V2 Migration as "AWAITING CEO DECISIONS" when it's actually COMPLETE. Updated to reflect V2 completion, HQ separation, coherence audit delivery, and correct blocker ages. +- Auditor P-Adaptive-Isogrid block: now 9 days. This is becoming chronic β€” may need Manager intervention to unblock (assign directly or close). +- Webster web_search API key: 5 days waiting on Mario. Still unresolved. + +### EVOLVE +- **Observation:** Team is in a holding pattern β€” 3 projects awaiting CEO input (Project Standard, Isogrid, Hydrotech). No productive work can proceed on these without Antoine. When he returns, priority triage is essential. +- **Observation:** The Auditor blocker (9 days) suggests the async challenge-in-channel approach isn't working for Tech Lead. Consider direct task assignment via sessions_spawn next time. +- No process changes needed. + +### SELF-DOCUMENT +- PROJECT_STATUS.md updated (was stale, now current). +- MEMORY.md already current from Feb 23 session. +- No other doc changes needed. diff --git a/hq/workspaces/nx-expert/AGENTS.md b/hq/workspaces/nx-expert/AGENTS.md index 2489e05e..df2d46fd 100644 --- a/hq/workspaces/nx-expert/AGENTS.md +++ b/hq/workspaces/nx-expert/AGENTS.md @@ -102,3 +102,15 @@ When working on a task: - Always append progress to `shared/project_log.md` See `shared/skills/taskboard/SKILL.md` for full documentation. + + +## Discord Posting Rules (MANDATORY β€” READ EVERY SESSION) +Read and follow: `/home/papa/atomizer/workspaces/shared/DISCORD-RULES.md` + +**CRITICAL RULES:** +1. You CAN see other agents' Discord posts β€” use them for context +2. You MUST NOT respond to other agents' posts unless you were directly @mentioned/named +3. You MUST NOT post social chatter ("great work", "looking forward to...", "πŸ‘", acknowledgments) +4. You ONLY post: deliverables, task status, concerns/blockers, or direct answers to Manager/Antoine +5. Before any Discord post, ask: "Does Antoine need to see this?" β€” if NO, respond NO_REPLY +6. Every unnecessary post wastes CEO's API budget β€” silence is the default diff --git a/hq/workspaces/optimizer/AGENTS.md b/hq/workspaces/optimizer/AGENTS.md index 0023fe5f..989b3585 100644 --- a/hq/workspaces/optimizer/AGENTS.md +++ b/hq/workspaces/optimizer/AGENTS.md @@ -83,3 +83,15 @@ When working on a task: - Always append progress to `shared/project_log.md` See `shared/skills/taskboard/SKILL.md` for full documentation. + + +## Discord Posting Rules (MANDATORY β€” READ EVERY SESSION) +Read and follow: `/home/papa/atomizer/workspaces/shared/DISCORD-RULES.md` + +**CRITICAL RULES:** +1. You CAN see other agents' Discord posts β€” use them for context +2. You MUST NOT respond to other agents' posts unless you were directly @mentioned/named +3. You MUST NOT post social chatter ("great work", "looking forward to...", "πŸ‘", acknowledgments) +4. You ONLY post: deliverables, task status, concerns/blockers, or direct answers to Manager/Antoine +5. Before any Discord post, ask: "Does Antoine need to see this?" β€” if NO, respond NO_REPLY +6. Every unnecessary post wastes CEO's API budget β€” silence is the default diff --git a/hq/workspaces/secretary/AGENTS.md b/hq/workspaces/secretary/AGENTS.md index 4413e37f..f164672e 100644 --- a/hq/workspaces/secretary/AGENTS.md +++ b/hq/workspaces/secretary/AGENTS.md @@ -103,3 +103,15 @@ If you fail to post to a Discord channel, **do NOT retry repeatedly or DM Antoin - Try once. If it fails, log the failure in `project_log.md` and move on. - Do NOT send status updates about "Discord being down" to Antoine's DM. - If a deliverable can't be posted, save it to a file in your `memory/` folder and note it for next session. + + +## Discord Posting Rules (MANDATORY β€” READ EVERY SESSION) +Read and follow: `/home/papa/atomizer/workspaces/shared/DISCORD-RULES.md` + +**CRITICAL RULES:** +1. You CAN see other agents' Discord posts β€” use them for context +2. You MUST NOT respond to other agents' posts unless you were directly @mentioned/named +3. You MUST NOT post social chatter ("great work", "looking forward to...", "πŸ‘", acknowledgments) +4. You ONLY post: deliverables, task status, concerns/blockers, or direct answers to Manager/Antoine +5. Before any Discord post, ask: "Does Antoine need to see this?" β€” if NO, respond NO_REPLY +6. Every unnecessary post wastes CEO's API budget β€” silence is the default diff --git a/hq/workspaces/shared/DISCORD-RULES.md b/hq/workspaces/shared/DISCORD-RULES.md new file mode 100644 index 00000000..05aae935 --- /dev/null +++ b/hq/workspaces/shared/DISCORD-RULES.md @@ -0,0 +1,30 @@ +# Discord Posting Rules (ALL AGENTS β€” MANDATORY) + +## Core Principle +You can **see** everything on Discord. You must **not respond** unless your response is substantive and necessary. + +## You MUST respond when: +- **Manager or Antoine directly asks you** something (by @mention or name) +- You have a **deliverable** to post (analysis, research, code, report, findings) +- You need to **flag a concern** β€” a technical error, blocker, risk, or disagreement with another agent's work +- You have a **status update** on an assigned task + +## You MUST NOT respond when: +- Another agent posts an intro, update, or deliverable β€” **do not comment, react, or acknowledge** +- You want to say "great work", "looking forward to collaborating", "πŸ‘", "exactly" β€” **NO social chatter** +- You were not @mentioned or named β€” **silence is the default** +- The conversation doesn't require your specific expertise β€” **stay quiet** +- You want to echo or rephrase what someone else said β€” **add value or add nothing** + +## The Test +Before posting, ask: **"Does Antoine need to see this?"** +- If YES β†’ post it +- If NO β†’ respond with NO_REPLY (do not post) + +## Inter-agent coordination +- For back-and-forth discussion with other agents, use `sessions_send` / `sessions_spawn` (internal, no Discord cost) +- Discord is the **company bulletin board** β€” post results, not conversations +- Reading other agents' posts gives you context β€” use it silently, don't reply to it + +## Token Budget +Every Discord response costs API tokens that Antoine pays for. Unnecessary responses = wasted money. When in doubt, **don't post**. diff --git a/hq/workspaces/shared/PROJECT_STATUS.md b/hq/workspaces/shared/PROJECT_STATUS.md index 2112fdf5..f30e3357 100644 --- a/hq/workspaces/shared/PROJECT_STATUS.md +++ b/hq/workspaces/shared/PROJECT_STATUS.md @@ -1,15 +1,19 @@ # Project Status Dashboard -Updated: 2026-02-23 04:00 AM (Nightly Digestion OP_11) +Updated: 2026-02-24 04:00 AM (Nightly Digestion OP_11) ## Active Projects -### πŸ“¦ AOM / V2 Migration (NEW β€” Feb 22) -- **Phase:** Documentation complete, migration plan reviewed -- **Status:** 🟑 AWAITING CEO DECISIONS (6 items) -- **What happened:** AOM completed (48 docs, ~8,830 lines, zero NX-only assumptions). Tool-agnostic architecture approved (DEC-030). V2 repo created at `192.168.86.50:3000/Antoine/Atomizer-V2` (DEC-032). Migration masterplan written + audited (11 findings addressed in V2 plan, 12-day timeline). -- **Deliverables ready:** AOM (Obsidian), V2 Migration Masterplan V2, Auditor audit, code review -- **Location:** Obsidian vault `P-Atomizer-Operating-Manual/`, `shared/reviews/` -- **Pending CEO decisions:** License type, GitHub name, Obsidian sync strategy, HQ separation, projects/ exclusion, repo visibility, timing to start +### πŸ“¦ Atomizer V2 Migration +- **Phase:** βœ… COMPLETE (2026-02-23) +- **What happened:** 8 commits pushed to Gitea. 218+ Python files, 58 tests passing. All phases done: repo bootstrap, core engine port, integration testing, reference implementation, CLAUDE.md, Data Contracts (5 dataclasses), Pipeline-NX integration tests. Dalidou validated: `import atomizer` v2.0.0 + 24/24 tests on Windows. +- **Post-migration:** Coherence audit delivered (conditional pass, 3 critical findings fixed in preflight). V1 tagged `v1-final`, kept active for current optimizations. AOMβ†’Obsidian auto-sync via crontab. Phase 6 (archive V1) deferred until Antoine switches production work. +- **Remaining roadmap:** Items 4-9 in ROADMAP-NEXT.md (docs/dev/) +- **Location:** `192.168.86.50:3000/Antoine/Atomizer-V2`, Obsidian vault `P-Atomizer-Operating-Manual/` +- **Owner:** Manager + +### 🏒 Atomizer/HQ Separation +- **Phase:** βœ… COMPLETE (2026-02-23) +- **Decision:** DEC-037 β€” Atomizer = product (V2 repo), HQ = AI operations team (HQ repo). AOM governs the product. 7 AOM docs updated. HQ repo pushed to Gitea (218 files). - **Owner:** Manager ### πŸ”© Hydrotech Beam β€” Optimization @@ -32,7 +36,6 @@ Updated: 2026-02-23 04:00 AM (Nightly Digestion OP_11) - **Status:** 🟑 AWAITING CEO REVIEW - **Deliverables ready:** Full technical spec (32KB), optimizer review, tech-lead review, webster review - **Location:** `shared/war-room-isogrid/` -- **Architecture:** Python Brain + NX Hands + Atomizer Manager (semi-automated isogrid optimization) - **Next:** CEO review β†’ implementation planning - **Owner:** Manager / Tech Lead @@ -43,12 +46,11 @@ Updated: 2026-02-23 04:00 AM (Nightly Digestion OP_11) - **Owner:** Webster ## Outstanding Blockers -- **Auditor** blocked on P-Adaptive-Isogrid review since Feb 16 (needs Tech Lead response) -- **Webster** web_search API key missing (needs Mario, since Feb 19) -- **Sub-agent spawning** intermittently broken ("pairing required" error, Feb 22) -- **4 projects** simultaneously awaiting CEO input β€” triage needed +- **Auditor** blocked on P-Adaptive-Isogrid review since Feb 16 (9 days β€” needs Tech Lead response) +- **Webster** web_search API key missing (needs Mario, since Feb 19 β€” 5 days) +- **3 projects** simultaneously awaiting CEO input β€” triage needed when Antoine returns ## Recent Completions -- 2026-02-22: AOM 100% complete (48 docs), tool-agnostic architecture, V2 migration plan + audit +- 2026-02-23: V2 Migration COMPLETE (8 commits, 218+ files, 58 tests). HQ Separation COMPLETE (DEC-037). Coherence audit + preflight fixes delivered. +- 2026-02-22: AOM 100% complete (48 docs), tool-agnostic architecture - 2026-02-18: Project standardization package assembled and reviewed -- 2026-02-17: System test orchestration validated diff --git a/hq/workspaces/shared/reviews/v2-migration-coherence-audit.md b/hq/workspaces/shared/reviews/v2-migration-coherence-audit.md new file mode 100644 index 00000000..ad0bcab0 --- /dev/null +++ b/hq/workspaces/shared/reviews/v2-migration-coherence-audit.md @@ -0,0 +1,417 @@ +# Cross-Document Coherence Audit β€” V2 Migration Pre-Flight +**Date:** 2026-02-23 +**Auditor:** Auditor (Subagent) +**Documents Reviewed:** 5 source document sets, 48 AOM docs (sampled), 4 pillars +**Scope:** Pre-migration alignment verification for Atomizer V2 migration + +--- + +## Executive Summary + +**VERDICT: CONDITIONAL PASS β€” Proceed with Cautions** + +The V2 migration can proceed, but **not as-is**. Three critical contradictions and five major gaps require resolution before Phase 1 execution. The documents are directionally aligned on architecture and tool strategy, but they diverge on: + +1. **Contracts implementation timing** (contradictory) +2. **Project Standard integration scope** (under-specified in Arsenal V3) +3. **Structural path definitions** (contradictions between Arsenal V3 and Migration Plan V3.1) + +### Top 3 Findings + +| # | Finding | Severity | Impact | +|---|---------|----------|--------| +| 1 | **Contracts deferral conflict:** Arsenal V3 says "contracts are canonical in architecture doc," Migration Plan V3.1 says "stubs only at P0, implement post-migration" β€” Architecture doc says "contracts are NEW" (not existing). This creates a circular dependency. | πŸ”΄ CRITICAL | Phase 1 cannot implement contracts that don't exist yet | +| 2 | **Project Standard orphaned in Arsenal V3:** Migration Plan V3.1 added full Project Standard integration (Β§5.5, templates/, init script) as P1 deliverables. Arsenal V3 Final (the architecture source) doesn't mention Project Standard at all β€” no templates folder, no init script, no study paths at `03-studies/`. | πŸ”΄ CRITICAL | Arsenal V3 is not the complete architecture β€” migration plan adds 15+ deliverables not defined upstream | +| 3 | **NX consolidation path mismatch:** Arsenal V3 says `atomizer/processors/geometry/nx_geometry.py`, Migration V3 says `atomizer/nx/` as consolidated NX home with journals/ subdirectory. Both are present in V2 structure tree but with different organizational philosophies. | 🟑 MAJOR | NX code may be split across two locations creating maintenance confusion | + +### Recommendation + +**APPROVE migration with mandatory pre-Phase-1 actions:** + +1. **Resolve contracts chicken-and-egg:** Either (a) write contract stub definitions NOW in architecture doc before migration starts, OR (b) accept that contracts are post-migration work and remove all P0/P1 references to implementing them +2. **Backport Project Standard to Arsenal V3:** Update Arsenal V3 Final (the canonical architecture) to include Project Standard as a first-class component with templates/, init script, and engine --project-root support +3. **Consolidate NX strategy:** CEO decision: Is NX a processor alongside others (`processors/geometry/nx_geometry.py`) OR is it a special legacy subsystem (`nx/` with all NX code consolidated)? Both structures exist in the plan β€” pick one. + +With these three corrections, the migration is **sound and executable**. + +--- + +## A. Structural Alignment + +**Question:** Does the V2 repo structure in the migration plan match what Arsenal V3 defines? + +### Alignment βœ… + +| Component | Arsenal V3 Final | Migration Plan V3.1 | Status | +|-----------|------------------|---------------------|--------| +| Three-layer architecture | `contracts/`, `processors/`, `orchestrator/` | βœ… Present in V2 tree | βœ… MATCH | +| Optimization engine | `atomizer/optimization/` | βœ… Present | βœ… MATCH | +| Extractors | `atomizer/extractors/` | βœ… Present | βœ… MATCH | +| Spec/config | `atomizer/spec/` | βœ… Present | βœ… MATCH | +| Dashboard | `dashboard/` | βœ… Present | βœ… MATCH | +| MCP servers | `mcp_servers/` | βœ… Present (placeholder) | βœ… MATCH | +| Knowledge base | `atomizer/knowledge/` | βœ… Present | βœ… MATCH | + +### Contradictions πŸ”΄ + +| Item | Arsenal V3 Says | Migration Plan V3.1 Says | Resolution Needed | +|------|----------------|-------------------------|-------------------| +| **Contracts location** | "Canonical in `ATOMIZER-TOOL-AGNOSTIC-ARCHITECTURE.md` Section 2.1" (Arsenal V3 Β§2.1–2.2) | `atomizer/contracts/*.py` files in V2 tree (Β§2) | ⚠️ **Problem:** Architecture doc (from AOM review) says contracts are NEW design, not existing code. Arsenal says "don't duplicate dataclass definitions" but doesn't provide them. Migration says "stub β†’ implement P1/P2" but Arsenal says "these are canonical already." **CIRCULAR DEPENDENCY.** | +| **NX module organization** | `atomizer/processors/geometry/nx_geometry.py` (Arsenal V3 Β§4.1 table) | `atomizer/nx/` with `solver.py`, `session_manager.py`, `journals/`, etc. (Migration Β§2, Β§3.7) | ⚠️ Arsenal treats NX as one processor among many. Migration treats NX as a special subsystem. Both exist in V2 tree. **SPLIT PERSONALITY.** | +| **Project Standard templates** | ❌ NOT MENTIONED in Arsenal V3 | `templates/project/` + `tools/init_project.py` + engine `--project-root` flag (Migration Β§2, Β§3.17, Β§5.5) | ⚠️ **Arsenal V3 is incomplete.** Migration added ~15 files and integration work that Arsenal never defined. | + +### Gaps 🟑 + +| Gap | Arsenal Defines | Migration Implements | Missing Link | +|-----|----------------|---------------------|--------------| +| **processors/base.py** | Arsenal V3 Β§4.1: "Abstract base classes (NEW)" | Migration Β§2: `atomizer/processors/base.py` | βœ… Implied by Arsenal, implemented by Migration β€” no gap | +| **orchestrator/pipeline.py** | Arsenal V3 Β§4.1: "Main evaluation loop" (NEW) | Migration Β§2: `atomizer/orchestrator/pipeline.py` | βœ… Implied by Arsenal, implemented by Migration | +| **Processor categories** | Arsenal V3 lists: geometry/, meshing/, solvers/, postprocessing/, converters/, surrogates/ | Migration Β§2 has all 6 categories | βœ… Full alignment | + +### Naming Consistency βœ… + +Folder names, module locations, and component boundaries are **consistent** where both documents define them. The contradictions are about *what's included*, not *what it's called*. + +**Verdict for Section A: 🟑 MAJOR ISSUES** +- Core architecture alignment is strong (3-layer model, folder structure, component names) +- Contracts and NX placement are contradictory +- Project Standard is a migration-only addition not backed by Arsenal + +--- + +## B. Project Standard Integration + +**Question:** Does the migration plan properly implement the Project Standard's folder structure, entry points, KB architecture, and study lifecycle? + +### What the Project Standard Defines + +From `P-Atomizer-Project-Standard/05-FINAL-RECOMMENDATION.md`: + +| Requirement | Specification | +|-------------|--------------| +| **Root structure** | 9 top-level items: README, CONTEXT, BREAKDOWN, DECISIONS, models/, kb/, studies/, playbooks/, deliverables/ | +| **Study numbering** | `{NN}_{slug}` format (01_doe_landscape, 02_tpe_refined, etc.) | +| **KB structure** | 4 folders: components/, materials/, fea/, dev/ | +| **Study lifecycle** | 3 phases: Setup (human) β†’ Execute (machine) β†’ Review (human+machine) | +| **Study internals** | 1_setup/, 2_iterations/, 3_results/, 3_insights/ | +| **Entry points** | README.md (single entry, not PROJECT+AGENT+STATUS split) | + +### What Migration Plan V3.1 Implements + +From Migration Plan Β§3.17, Β§5.5: + +| Component | Migration Status | Location | +|-----------|-----------------|----------| +| **Template files** | βœ… ~14 .template files | `templates/project/` | +| **Scaffolding script** | βœ… NEW script | `tools/init_project.py` | +| **Engine integration** | βœ… `--project-root` flag | `atomizer/optimization/engine.py`, `atomizer/study/creator.py` | +| **AOM reference** | βœ… Pillar 2 cross-reference planned | `docs/AOM/02-Operations/` | + +### Does Migration Match Project Standard? + +| Project Standard Requirement | Migration Plan Implementation | Status | +|-------------------------------|------------------------------|--------| +| **9-item root structure** | Template includes PROJECT.md, AGENT.md, STATUS.md, DECISIONS.md, CHANGELOG.md, 00-context/, 01-models/, 02-kb/, 03-studies/, etc. | ⚠️ **MISMATCH:** Standard recommends **single README.md**, not PROJECT+AGENT+STATUS split. Migration uses OLD spec structure (Β§9 of spec superseded by Β§5 final recommendation). | +| **KB 4-folder structure** | Template has design/ (5 branches), analysis/ (7 subdirs), manufacturing/, domain/, introspection/ | πŸ”΄ **CONTRADICTION:** Standard says 4 folders (components/, materials/, fea/, dev/). Template has **5 branches with 15+ subdirs** (the OLD rejected spec). | +| **Study lifecycle** | Engine integration supports `--project-root`, studies at `03-studies/` | βœ… MATCH | +| **Study numbering** | Standard: `{NN}_{slug}`. Engine: compatible | βœ… MATCH | +| **atomizer_spec.json** | Standard: per-study spec at study root. Engine: loads from study path | βœ… MATCH | + +### Critical Finding πŸ”΄ + +**The Migration Plan's Project Standard templates (Β§3.17 table) are based on the REJECTED SPECIFICATION (00-SPECIFICATION.md), NOT the APPROVED FINAL RECOMMENDATION (05-FINAL-RECOMMENDATION.md).** + +Evidence: +- Final Recommendation says: "README.md (single entry point, replaces PROJECT+AGENT+STATUS)" +- Migration template table lists: "PROJECT.md.template, AGENT.md.template, STATUS.md.template" +- Final Recommendation says: "KB 4 folders (components/, materials/, fea/, dev/)" +- Migration template structure shows: "design/, analysis/ with 7 subdirs, manufacturing/, domain/, introspection/" + +**The migration is implementing the WRONG standard.** + +### Gaps 🟑 + +| Gap | Description | +|-----|-------------| +| **Template versioning** | Project Standard spec Β§9 calls for `.atomizer/template-version.json` to track which standard version a project uses. Migration lists this file but doesn't specify version tagging strategy. | +| **Migration script for existing projects** | Standard discusses migrating Hydrotech Beam (~15 min effort). Migration plan doesn't include a migration helper for V1 projects to Project Standard structure. | + +**Verdict for Section B: πŸ”΄ CRITICAL FAILURE** +- Migration implements the **rejected spec**, not the **approved recommendation** +- Templates must be completely rewritten before Phase 1 +- This affects ~15 files in the migration inventory (Β§3.17) + +--- + +## C. AOM Consistency + +**Question:** Does the migration plan's documentation structure align with the AOM's 4-pillar organization? Would migration break AOM references? + +### AOM Structure (from MAP.md) + +| Pillar | Docs | Purpose | +|--------|------|---------| +| 01-Philosophy | 9 docs | Mission, architecture, component map, tool-agnostic design | +| 02-Operations | 15 docs | Study lifecycle, protocols, specs, integrations | +| 03-Developer | 10 docs | Codebase, API, extension points, processor dev | +| 04-Knowledge | 6 docs | LAC, KB architecture, failure patterns | + +**Total:** 48 docs (40 main docs + Audit/ + Phase-4-LLM-Layer/ + Phase-5-Living-Protocol/) + +### Migration Plan's AOM Deployment + +From Migration Β§5: + +``` +docs/ +β”œβ”€β”€ AOM/ +β”‚ β”œβ”€β”€ README.md # MAP (renamed) +β”‚ β”œβ”€β”€ 01-Philosophy/ # 9 docs +β”‚ β”œβ”€β”€ 02-Operations/ # 15 docs +β”‚ β”œβ”€β”€ 03-Developer/ # 10 docs +β”‚ β”œβ”€β”€ 04-Knowledge/ # 6 docs +β”‚ └── Audit/ # 2 docs +β”œβ”€β”€ protocols/ # OP/SYS/EXT migrated from V1 +β”œβ”€β”€ QUICK_REF.md +└── guides/ +``` + +**Alignment:** βœ… **PERFECT 1:1 MAPPING** + +The migration preserves the exact 4-pillar structure. MAP.md β†’ README.md rename is correct (Gitea auto-renders README). + +### Path Breakage Check + +**Question:** Do any AOM docs reference V1 paths that the migration would break? + +Sample from AOM docs reviewed: +- Component Map (Β§4) references `atomizer/contracts/`, `atomizer/processors/`, `atomizer/orchestrator/` β†’ βœ… These paths exist in V2 structure +- Tool-Agnostic Architecture (Β§8) describes the 3-layer model β†’ βœ… V2 implements this exactly +- Arsenal Reference would reference MCP servers β†’ βœ… `mcp_servers/` placeholder exists in V2 + +**Potential Breaks:** + +| AOM Doc | Likely References | V2 Status | Risk | +|---------|-------------------|-----------|------| +| 02-Operations/09-NX-Integration | May reference `optimization_engine/nx/` paths | ⚠️ V2 has `atomizer/nx/` β€” paths changed | 🟑 Needs path updates | +| 03-Developer/01-Codebase-Architecture | Module dependency map | ⚠️ All `optimization_engine.*` β†’ `atomizer.*` | 🟑 Needs update | +| 03-Developer/03-API-Reference | Import statements | ⚠️ Import paths changed | 🟑 Needs update | +| 04-Knowledge/02-Knowledge-Base-Architecture | May reference old `knowledge_base/` | βœ… V2 has `atomizer/knowledge/` | βœ… Compatible if relative | + +**Mitigation:** Migration Phase 0 includes AOM link conversion (Β§5.1: convert `[[wiki-links]]` β†’ relative MD links). This MUST also update any code paths in AOM docs from `optimization_engine/` β†’ `atomizer/`. + +### AOM Cross-References to Project Standard + +Migration Β§5.5.4 says: "AOM Pillar 2 (Operations) references the Project Standard spec" + +**Gap:** The AOM MAP.md reviewed does NOT currently mention Project Standard. The only reference is in Related Projects section pointing to `P-Atomizer-Project-Standard/MAP`. + +**Required action:** During AOM deployment (Phase 0), add Project Standard guide to `02-Operations/` (e.g., `02-Operations/16-Project-Organization-Standard.md` or update existing docs to reference templates/). + +**Verdict for Section C: 🟒 OK with Minor Updates** +- AOM pillar structure perfectly preserved +- Path updates needed in 3–5 AOM docs (tracked in Phase 0) +- Project Standard cross-reference is a forward commitment, not a current contradiction + +--- + +## D. Contradictions Table + +| Doc1 Says | Doc2 Says | Nature | Severity | +|-----------|-----------|--------|----------| +| **Arsenal V3 Β§2.2:** "Contract dataclasses are canonical in `ATOMIZER-TOOL-AGNOSTIC-ARCHITECTURE.md` Section 2.1. Do not duplicate." | **Tool-Agnostic Architecture (AOM):** Contracts are described as NEW design pattern. Section 2.1 lists what they should contain but doesn't provide Pydantic/dataclass implementations. | Contracts don't exist yet, but Arsenal references them as canonical source. | πŸ”΄ CRITICAL | +| **Arsenal V3 Β§2.2:** "All contract details reference Section 2.1 above" (implying contracts are defined) | **Migration V3.1 Β§2, Phase 1:** "Create contract stubs (docstrings only, no implementation). DEFERRED to post-migration." | Arsenal says contracts exist. Migration says create stubs. Circular dependency. | πŸ”΄ CRITICAL | +| **Arsenal V3 Β§4.1:** NX listed as `atomizer/processors/geometry/nx_geometry.py` | **Migration Β§2 + Β§3.7:** NX consolidated at `atomizer/nx/` with `solver.py`, `session_manager.py`, `journals/` | Is NX a single geometry processor or a subsystem? | 🟑 MAJOR | +| **Arsenal V3 Sprint 3 Β§5.3:** "Topology Engineer (new)" activated Sprint 3 | **Webster Review Β§4:** "Topology is post-MVP future (Arsenal V3 Β§3.1). Role activation conflicts with scope boundary." | Topology Engineer exists in agent roster but topology is explicitly out of scope. | 🟑 MAJOR | +| **Project Standard Final Recommendation:** "README.md (single entry point)" | **Migration Β§3.17 template table:** "PROJECT.md.template + AGENT.md.template + STATUS.md.template" | Migration implements rejected spec, not approved recommendation. | πŸ”΄ CRITICAL | +| **Project Standard Final Recommendation:** "4-folder KB: components/, materials/, fea/, dev/" | **Migration Β§3.17 template structure:** "design/ β†’ analysis/ (7 subdirs) β†’ manufacturing/ β†’ domain/ β†’ introspection/" | Migration uses OLD 5-branch spec rejected by final recommendation. | πŸ”΄ CRITICAL | +| **Arsenal V3 Β§3.1:** OpenFOAM is "Expansion Stack (Sprints 4-6)" | **Arsenal V3 Β§5.4:** Sprint 4 delivers OpenFOAM lane | βœ… Self-consistent β€” expansion starts Sprint 4 | 🟒 OK | +| **Arsenal V3 Β§4.1:** `launch_dashboard.py` listed in root | **Migration Β§2:** `dashboard/launch_dashboard.py` | Path moved β€” minor | 🟒 OK | + +**Summary:** 3 critical contradictions, 2 major contradictions, 0 architecture-breaking contradictions (the core 3-layer model is fully aligned). + +--- + +## E. Gaps Table + +### Defined in Source, Missing from Migration + +| Defined In | What's Defined | Missing From | Impact | +|------------|---------------|--------------|--------| +| Arsenal V3 Β§6 (Agent Roster) | 19 agents: Manager, Technical Lead, Optimizer, NX Expert, Post-Processor, Reporter, Study Builder, Auditor, Researcher, Developer, KB, IT, **Meshing Engineer, CFD Specialist, Coupling Engineer, Topology Engineer, MDO Architect, MCP Engineer**, Secretary | Migration Plan (repo structure) | 🟒 OK β€” agents are runtime entities, not repo structure. Migration doesn't need to define agents. | +| Arsenal V3 Β§8 (MCP Servers) | Top 4 MCP servers: MCP-CalculiX, MCP-Gmsh, MCP-Build123d, MCP-pyNastran | Migration Β§2 | 🟑 **GAP:** Migration has `mcp_servers/` placeholder but no implementation plan or file inventory. Should list README.md at minimum. | +| Tool-Agnostic Architecture (AOM) | Abstract base classes: `SolverProcessor`, `GeometryProcessor`, `MeshProcessor` with specific method signatures | Migration Β§2 | βœ… Migration says "Create `atomizer/processors/base.py`" β€” covered. | +| Arsenal V3 Β§2.3 (AOM Placement) | "All implementation mapping lands inside V2 repo paths under atomizer/contracts/, processors/, orchestrator/, optimization/, mcp_servers/" | Migration Plan V2 tree | βœ… V2 tree includes all 5 paths. Full alignment. | +| Project Standard spec Β§3 (Study Internals) | Study folder structure: `1_setup/`, `2_iterations/`, `3_results/`, `3_insights/` | Migration Plan, Arsenal V3 | 🟑 **GAP:** Neither Arsenal nor Migration describes study internals structure. Project Standard defines it, but no one implements engine support for `1_setup/model/` copying or `3_insights/` auto-generation. | + +### Defined in Migration, Not in Source + +| Migration Defines | Source Coverage | Gap Type | +|------------------|----------------|----------| +| **Project Standard templates (~15 files)** | ❌ Not in Arsenal V3. Not in AOM (yet). In separate spec doc only. | πŸ”΄ **CRITICAL:** Arsenal V3 is supposed to be the canonical architecture. It's incomplete. | +| **`atomizer/_compat.py` import shim** | ❌ Not in Arsenal V3 | 🟒 OK β€” migration-specific transition tool, not architecture | +| **`tools/init_project.py` scaffolding script** | ❌ Not in Arsenal V3 | πŸ”΄ **MAJOR:** If Project Standard is first-class (per Migration Β§5.5), Arsenal should define this. | +| **`--project-root` engine flag** | ❌ Not in Arsenal V3 | πŸ”΄ **MAJOR:** Needed for Project Standard study paths. Not in architecture spec. | +| **Phase-by-phase rollback procedures (Migration Β§16)** | ❌ Not in Arsenal V3 or Webster Review | 🟒 OK β€” operational concern, not architecture | +| **Pre-commit hooks config (Migration Β§13)** | ❌ Not in Arsenal V3 | 🟒 OK β€” repo hygiene, not architecture | + +**Summary:** 5 major gaps. The biggest: Arsenal V3 doesn't define Project Standard integration, but Migration treats it as first-class architecture. + +--- + +## F. Naming & Path Consistency + +**Question:** Do all documents use consistent naming for modules, folders, and components? + +### Folder/Module Names βœ… + +| Component | Arsenal V3 | Migration V3.1 | AOM (Component Map) | Consistent? | +|-----------|------------|---------------|---------------------|-------------| +| Contracts | `atomizer/contracts/` | `atomizer/contracts/` | `atomizer/contracts/` | βœ… | +| Processors | `atomizer/processors/` | `atomizer/processors/` | `atomizer/processors/` | βœ… | +| Orchestrator | `atomizer/orchestrator/` | `atomizer/orchestrator/` | `atomizer/orchestrator/` | βœ… | +| Optimization | `atomizer/optimization/` | `atomizer/optimization/` | `atomizer/optimization/` | βœ… | +| Extractors | `atomizer/extractors/` | `atomizer/extractors/` | `atomizer/extractors/` | βœ… | +| Spec/Config | `atomizer/spec/` | `atomizer/spec/` | `atomizer/spec/` | βœ… | +| Knowledge | `atomizer/knowledge/` | `atomizer/knowledge/` | `atomizer/knowledge/` | βœ… | +| Dashboard | `dashboard/` | `dashboard/` | `dashboard/` | βœ… | +| MCP Servers | `mcp_servers/` | `mcp_servers/` | `mcp_servers/` | βœ… | + +**Naming is 100% consistent** where all documents define the same component. + +### Module Renaming Consistency βœ… + +| V1 Name | V2 Name (Arsenal) | V2 Name (Migration) | Consistent? | +|---------|------------------|---------------------|-------------| +| `optimization_engine/core/runner.py` | `atomizer/optimization/engine.py` | `atomizer/optimization/engine.py` | βœ… | +| `optimization_engine/extractors/extractor_library.py` | `atomizer/extractors/registry.py` | `atomizer/extractors/registry.py` | βœ… | +| `optimization_engine/config/` | `atomizer/spec/` | `atomizer/spec/` | βœ… | + +### Component Terminology βœ… + +| Concept | Arsenal V3 | Migration V3.1 | AOM | Consistent? | +|---------|------------|---------------|-----|-------------| +| Universal data types | "Contracts" | "Contracts" | "Data Contracts" | βœ… | +| Tool-specific translators | "Processors" | "Processors" | "Processors" | βœ… | +| Pipeline controller | "Orchestrator" | "Orchestrator" | "Orchestrator" | βœ… | +| Study configuration | "AtomizerSpec v3.0" | "AtomizerSpec v3.0" | "AtomizerSpec" | βœ… | +| Optimization algorithms | "Optuna/pymoo/OpenMDAO" | "Optuna/pymoo" | "Optuna/pymoo" | βœ… | + +### Inconsistencies 🟑 + +| Inconsistency | Where | Impact | +|--------------|-------|--------| +| **NX placement** | Arsenal: `processors/geometry/nx_geometry.py`. Migration: `atomizer/nx/` (full module) + `processors/geometry/nx_geometry.py` (also listed in tree Β§2). | 🟑 MAJOR β€” both exist in V2 tree, unclear which is canonical | +| **Surrogates location** | Arsenal: `processors/surrogates/` (9 files). Migration also has `optimization/surrogates/` (GNN). Both exist. | 🟑 MINOR β€” Tech Lead noted this in V3 review. Need docstring clarification or consolidation. | + +**Verdict for Section F: 🟒 GOOD** +- 99% naming consistency across all documents +- NX placement ambiguity is the only significant issue (same as structural alignment finding) + +--- + +## Recommendations (Prioritized) + +### πŸ”΄ CRITICAL (Blockers β€” Must Fix Before Phase 1) + +| # | Recommendation | Affected Phases | Effort | +|---|---------------|----------------|--------| +| C1 | **Resolve contracts chicken-and-egg:** Write contract stub definitions in Tool-Agnostic Architecture doc (AOM Pillar 1) NOW, before migration starts. Provide at minimum: class signatures, field lists, docstrings. OR accept contracts are post-migration and remove them from Phase 1 scope entirely. | Phase 0, Phase 1 | πŸ• 4 hours (write stubs) | +| C2 | **Rewrite Project Standard templates:** The current template list (Migration Β§3.17) implements the REJECTED spec. Rewrite all 14 templates to match the APPROVED Final Recommendation: single README.md (not PROJECT+AGENT+STATUS), 4-folder KB (not 5-branch). | Phase 1 | πŸ•πŸ• 8 hours (rewrite 14 templates) | +| C3 | **Backport Project Standard to Arsenal V3:** Update Arsenal V3 Final to include Project Standard as a first-class component. Add: templates/ folder, init script, --project-root flag, study path conventions. Arsenal must be the complete architecture source. | Pre-Phase 0 | πŸ•πŸ• 6 hours (update Arsenal doc) | + +### 🟑 MAJOR (High Priority β€” Resolve in Phase 0 or Phase 1) + +| # | Recommendation | Affected Phases | Effort | +|---|---------------|----------------|--------| +| M1 | **Consolidate NX strategy:** CEO decision required. Is NX (a) a processor like any other (`processors/geometry/nx_geometry.py` only), OR (b) a special legacy subsystem (`atomizer/nx/` with all NX code including journals/). Remove one or clearly document why both exist. | Phase 1 | πŸ• 2 hours (decide + update docs) | +| M2 | **Update AOM code paths:** During Phase 0 AOM deployment, update 3–5 AOM docs that reference `optimization_engine/` paths β†’ `atomizer/`. Specifically: 02-Operations/09-NX-Integration, 03-Developer/01-Codebase-Architecture, 03-Developer/03-API-Reference. | Phase 0 | πŸ• 2 hours | +| M3 | **Add Project Standard reference to AOM:** Create `docs/AOM/02-Operations/16-Project-Organization-Standard.md` explaining the template system, init script, and --project-root integration. Cross-reference from Study Lifecycle doc. | Phase 0 | πŸ• 3 hours | +| M4 | **Clarify study internals implementation:** Project Standard defines `1_setup/`, `2_iterations/`, `3_results/`, `3_insights/` study structure. Migration assumes engine supports this but doesn't specify implementation. Verify `atomizer/study/creator.py` creates this structure, or add to Phase 1 scope. | Phase 1 | πŸ• 4 hours (code + verify) | +| M5 | **Document MCP server scope:** Arsenal V3 says top 4 MCP servers (CalculiX, Gmsh, Build123d, pyNastran) are MVP. Migration has `mcp_servers/` placeholder. Add `mcp_servers/README.md` with implementation roadmap, or explicitly defer to post-MVP. | Phase 0 or Phase 2 | πŸ• 1 hour (README) | + +### 🟒 MINOR (Nice to Have β€” Address During Migration) + +| # | Recommendation | Effort | +|---|---------------|--------| +| N1 | **Topology Engineer activation:** Arsenal activates Topology Engineer in Sprint 3, but topology is post-MVP. Either defer activation or scope role to "benchmark prep only" as Webster suggested. | πŸ• 30 min (update agent roster) | +| N2 | **Surrogates consolidation:** `processors/surrogates/` and `optimization/surrogates/` both exist. Add docstring to each `__init__.py` explaining the distinction (processors = classical ML, optimization = GNN). Or consolidate if redundant. | πŸ• 1 hour | +| N3 | **Template versioning strategy:** `.atomizer/template-version.json` exists in template list but versioning scheme is undefined. Define format: `{"standard_version": "1.0.0", "deployed_date": "2026-02-23"}`. | πŸ• 30 min | + +--- + +## Risk Assessment + +| Risk | Likelihood | Impact | Mitigation | +|------|------------|--------|-----------| +| **Contracts undefined causes Phase 1 failure** | HIGH (if not fixed) | CRITICAL | C1: Write stubs NOW or defer contracts | +| **Wrong Project Standard templates deployed** | HIGH (templates are wrong) | CRITICAL | C2: Rewrite templates before Phase 1 | +| **NX code fragmentation** | MEDIUM | MAJOR | M1: Consolidate before Phase 1 | +| **AOM paths broken after migration** | MEDIUM | MAJOR | M2: Update during Phase 0 | +| **Study structure assumptions break** | MEDIUM | MAJOR | M4: Verify engine implementation | +| **Arsenal V3 incomplete as architecture source** | MEDIUM | MAJOR | C3: Backport Project Standard | + +--- + +## Verification Checklist (for CEO/Manager) + +Before approving Phase 0 start: + +- [ ] **C1 resolved:** Contracts either (a) have stub definitions in AOM, OR (b) are removed from Phase 1 scope +- [ ] **C2 resolved:** Project Standard templates rewritten to match Final Recommendation (README.md single entry, 4-folder KB) +- [ ] **C3 resolved:** Arsenal V3 updated to include Project Standard as first-class component +- [ ] **M1 resolved:** NX consolidation strategy decided and documented +- [ ] **M2 tracked:** AOM path updates added to Phase 0 checklist +- [ ] **M3 tracked:** Project Standard AOM doc added to Phase 0 deliverables + +--- + +## Appendices + +### Appendix A: Document Versions Reviewed + +| Document | Version/Date | Location | +|----------|-------------|----------| +| Arsenal V3 Webster Review | 2026-02-23 | `Atomizer-AtomasteAI/Development/ARSENAL-V3-WEBSTER-REVIEW.md` | +| Arsenal V3 Final | 2026-02-23 | `Atomizer-AtomasteAI/Development/ARSENAL-V3-FINAL.md` | +| Project Standard Final Recommendation | 2026-02-19 | `P-Atomizer-Project-Standard/05-FINAL-RECOMMENDATION.md` | +| Migration Plan V3.1 | 2026-02-23 (V3.1 amendment) | `Atomizer-AtomasteAI/Development/ATOMIZER-V2-MIGRATION-MASTERPLAN-V3.md` | +| AOM MAP | 2026-02-21 | `P-Atomizer-Operating-Manual/MAP - Atomizer Operating Manual.md` | +| AOM Component Map | 2026-02-22 | `P-Atomizer-Operating-Manual/01-Philosophy/04-Component-Map.md` | +| AOM Tool-Agnostic Architecture | 2026-02-22 | `P-Atomizer-Operating-Manual/01-Philosophy/08-Tool-Agnostic-Architecture.md` | + +### Appendix B: Files Counted + +- **Arsenal V3:** 1 architecture doc, 6 sprints, 19 agent definitions, 4 MCP servers, 3 architectural layers +- **Migration Plan V3.1:** 8 phases, 163 Python files, 48 AOM docs, 15+ Project Standard templates, 6 verification checklists +- **Project Standard:** 9 top-level items, 14 template files, 4 KB folders, 3 lifecycle phases +- **AOM:** 4 pillars, 48 docs (40 core + 8 auxiliary), 19 agent architecture + +### Appendix C: Methodology + +1. **Read all 5 source document sets in full** (Arsenal Webster Review, Arsenal Final, Project Standard Final Rec, Migration V3.1, AOM MAP + 2 key architecture docs) +2. **Extract structural definitions** from each (folder paths, component names, module locations) +3. **Cross-reference systematically** across 6 audit dimensions (A-F) +4. **Tag contradictions** by severity (πŸ”΄ critical if blocks migration, 🟑 major if causes confusion, 🟒 minor if cosmetic) +5. **Trace gaps** bidirectionally (defined in A but missing from B, AND defined in B but missing from A) +6. **Document every finding** with section references (e.g., "Arsenal V3 Β§2.2 says X, Migration Β§3.17 says Y") +7. **Prioritize recommendations** (Critical β†’ Major β†’ Minor) + +--- + +**TASK:** Cross-document coherence audit +**STATUS:** complete +**RESULT:** 3 critical contradictions found (contracts undefined, wrong Project Standard templates, Arsenal incomplete). 5 major gaps identified. Migration can proceed after resolving C1-C3. +**CONFIDENCE:** high +**NOTES:** +- Arsenal V3 and Tool-Agnostic Architecture are directionally sound but have implementation gaps (contracts are described but not defined, Project Standard not included) +- Migration Plan V3.1 is executable AFTER correcting the Project Standard template error (currently implements rejected spec) +- The core 3-layer architecture (contracts/processors/orchestrator) is perfectly aligned across all documents β€” this is the strongest finding +- NX consolidation ambiguity is solvable with a CEO decision (not a documentation error, just an unstated choice) +- Recommend 1-2 day hold before Phase 0 start to resolve C1-C3 + +--- + +*Audit completed by Auditor (Subagent) on 2026-02-23* +*All findings traceable to source documents with section references* +*Severity ratings follow Atomizer audit protocol (πŸ”΄πŸŸ‘πŸŸ’)* diff --git a/hq/workspaces/shared/reviews/v2-migration-preflight-fixes.md b/hq/workspaces/shared/reviews/v2-migration-preflight-fixes.md new file mode 100644 index 00000000..7e3f0b93 --- /dev/null +++ b/hq/workspaces/shared/reviews/v2-migration-preflight-fixes.md @@ -0,0 +1,178 @@ +# V2 Migration Pre-Flight Fixes β€” Critical Issues Resolved + +**Date:** 2026-02-23 +**Auditor:** Auditor (Subagent) +**Task:** Fix 3 critical issues found in V2 Migration Coherence Audit +**Status:** βœ… Complete + +--- + +## Summary + +All 3 critical pre-flight issues have been resolved. The migration plan is now aligned with approved specifications and can proceed to Phase 0. + +--- + +## πŸ”§ FIX C1: Project Standard Templates β€” CORRECTED + +**Problem:** Migration Plan V3.1 Section 3.17 listed Project Standard templates based on the REJECTED specification (00-SPECIFICATION.md) instead of the APPROVED Final Recommendation (05-FINAL-RECOMMENDATION.md). + +**Specific issues:** +- Used PROJECT.md + AGENT.md + STATUS.md (rejected 3-file split) +- Used 00-context/ folder structure (rejected) +- Used 5-branch KB taxonomy with 15+ subfolders (rejected) +- Used numbered top-level folders like 01-models/, 02-kb/ (rejected) + +**Fix applied:** +βœ… Updated Section 3.17 to APPROVED structure: +- Single README.md entry point (replaces PROJECT+AGENT+STATUS) +- CONTEXT.md, BREAKDOWN.md, DECISIONS.md at root +- 4-folder KB: components/, materials/, fea/, dev/ +- Semantic folder names (models/, kb/, studies/, playbooks/, deliverables/, images/) +- ~15 template files β†’ ~10 template files (correct count) + +βœ… Updated Section 5.5 template tree visualization +βœ… Updated Phase 1 verification checklist to check for correct structure +βœ… Added auditor note documenting the correction + +**Files modified:** +- `/home/papa/obsidian-vault/2-Projects/Atomizer-AtomasteAI/Development/ATOMIZER-V2-MIGRATION-MASTERPLAN-V3.md` + - Section 2 (repo structure tree) + - Section 3.17 (template file disposition) + - Section 5.5 (template folder visualization) + - Section 6.1 (Phase 1 verification checklist) + - Header: V3.1 β†’ V3.2 + +**Source authority:** `P-Atomizer-Project-Standard/05-FINAL-RECOMMENDATION.md` (APPROVED) + +--- + +## πŸ”§ FIX C2: Contracts Deferral β€” RESOLVED + +**Problem:** Contracts were marked "DEFERRED to post-migration" but still referenced as P0 stubs. Arsenal V3 references contracts as canonical but Tool-Agnostic Architecture doc doesn't provide implementations. Circular dependency. + +**CEO-aligned approach:** Port working code first, abstract later. + +**Fix applied:** +βœ… Changed contracts from P0 (stubs) to P2 (post-migration abstraction) +βœ… Removed "create stubs with docstrings at P0" language +βœ… Changed to "empty __init__.py placeholder at P0" only +βœ… Added Tech Lead + Auditor note: + +> "Contracts deferred per Tech Lead recommendation + Auditor finding. V2 ports working code first; contracts abstraction layer added in P2 once the codebase is stable." + +βœ… Updated Phase 1 task 1.1 description +βœ… Updated V3 amendment log entry V3-01 +βœ… Updated repo structure tree comments + +**Files modified:** +- `/home/papa/obsidian-vault/2-Projects/Atomizer-AtomasteAI/Development/ATOMIZER-V2-MIGRATION-MASTERPLAN-V3.md` + - Section 2 (atomizer/contracts/ tree) + - Section 6 Phase 1 task 1.1 + - Section 17 amendment log V3-01 + - Header: revision history + +**Rationale:** V1 has no unified data model. Introducing contracts during migration adds unnecessary risk. Deferred to P2 when V2 codebase is stable and patterns are clear. + +--- + +## πŸ”§ FIX C3: Arsenal V3 Project Standard Integration β€” ADDED + +**Problem:** Arsenal V3 Final is the canonical architecture source but didn't mention the Project Standard at all. Migration Plan added ~15 files and engine integration work that Arsenal never defined. + +**Gap:** Arsenal incomplete as architecture source. + +**Fix applied:** +βœ… Added new Section 4.4 to Arsenal V3 Final: "Project Standard (First-Class Component)" + +**Section 4.4 includes:** +- Purpose and rationale (why it's first-class architecture) +- 9-item root structure definition +- 4-folder KB architecture +- Study organization and naming convention +- Study internals (1_setup/, 2_iterations/, 3_results/, 3_insights/) +- V2 repository integration: + - templates/project/ location + - tools/init_project.py scaffolding script + - --project-root engine flag + - atomizer init CLI workflow +- Migration priority: P1 +- Cross-reference to Migration Plan V3.2 Section 3.17 and 5.5 + +**Files modified:** +- `/home/papa/obsidian-vault/2-Projects/Atomizer-AtomasteAI/Development/ARSENAL-V3-FINAL.md` + - Added Section 4.4 (after Contract Files, before Sprint Plan) + +**Impact:** Arsenal V3 is now the complete architecture source. Project Standard is documented as a first-class component alongside contracts/processors/orchestrator. + +--- + +## Verification + +### Pre-Fix State +- ❌ Migration templates based on rejected spec +- ❌ Contracts P0 stubs conflict with "deferred" status +- ❌ Arsenal V3 missing Project Standard entirely + +### Post-Fix State +- βœ… Migration templates match APPROVED Final Recommendation +- βœ… Contracts cleanly deferred to P2 with rationale +- βœ… Arsenal V3 documents Project Standard as first-class architecture +- βœ… All documents internally consistent +- βœ… Migration Plan version bumped to V3.2 +- βœ… All changes marked with πŸ”§ FIX emoji for traceability + +--- + +## Phase 0 Pre-Flight Checklist (Updated) + +Before starting Phase 0: + +- [x] **C1 resolved:** Project Standard templates rewritten to match Final Recommendation +- [x] **C2 resolved:** Contracts deferred to P2 with Tech Lead + Auditor note +- [x] **C3 resolved:** Arsenal V3 updated to include Project Standard as first-class component +- [x] **Verification checklists updated:** Phase 1 checklist validates correct template structure +- [x] **Version bumped:** Migration Plan V3.1 β†’ V3.2 +- [x] **Cross-references updated:** Migration references Arsenal Β§4.4, Arsenal references Migration Β§3.17 + Β§5.5 + +**Status:** 🟒 CLEARED FOR PHASE 0 + +--- + +## Files Modified Summary + +| File | Sections Modified | Change Type | +|------|------------------|-------------| +| `ATOMIZER-V2-MIGRATION-MASTERPLAN-V3.md` | Header (version), Β§2 (tree), Β§3.17 (templates), Β§5.5 (visualization), Β§6.1 (verification), Β§17 (amendments) | πŸ”§ Corrections + version bump | +| `ARSENAL-V3-FINAL.md` | New Β§4.4 (Project Standard) | βž• Architecture addition | + +--- + +## Confidence Assessment + +**CONFIDENCE: HIGH** + +**Rationale:** +1. All fixes directly address audit findings C1-C3 with source document references +2. Changes are surgical β€” no scope creep, no unrelated edits +3. Every fix is traceable (πŸ”§ emoji marking) +4. Source authority clear: Final Recommendation (approved), Tech Lead review, Auditor audit +5. Cross-references bidirectional (Arsenal ↔ Migration Plan) +6. Verification checklists updated to prevent regression +7. Version bump documented in revision history + +**No unresolved issues.** Migration is ready for Phase 0 execution. + +--- + +## Next Actions (For Manager/CEO) + +1. **Review this fix summary** β€” confirm all changes align with CEO intent +2. **Approve Phase 0 start** β€” migration is now pre-flight cleared +3. **Monitor Phase 1 verification** β€” ensure correct templates are deployed (automated checklist in Β§6.1) + +--- + +*Fixes completed by Auditor (Subagent) on 2026-02-23* +*All changes marked with πŸ”§ FIX emoji for traceability* +*Source documents: Migration Plan V3.2, Arsenal V3 Final, Project Standard Final Recommendation* diff --git a/hq/workspaces/study-builder/AGENTS.md b/hq/workspaces/study-builder/AGENTS.md index 3e28e5e7..f4974d2c 100644 --- a/hq/workspaces/study-builder/AGENTS.md +++ b/hq/workspaces/study-builder/AGENTS.md @@ -83,3 +83,15 @@ When working on a task: - Always append progress to `shared/project_log.md` See `shared/skills/taskboard/SKILL.md` for full documentation. + + +## Discord Posting Rules (MANDATORY β€” READ EVERY SESSION) +Read and follow: `/home/papa/atomizer/workspaces/shared/DISCORD-RULES.md` + +**CRITICAL RULES:** +1. You CAN see other agents' Discord posts β€” use them for context +2. You MUST NOT respond to other agents' posts unless you were directly @mentioned/named +3. You MUST NOT post social chatter ("great work", "looking forward to...", "πŸ‘", acknowledgments) +4. You ONLY post: deliverables, task status, concerns/blockers, or direct answers to Manager/Antoine +5. Before any Discord post, ask: "Does Antoine need to see this?" β€” if NO, respond NO_REPLY +6. Every unnecessary post wastes CEO's API budget β€” silence is the default diff --git a/hq/workspaces/technical-lead/AGENTS.md b/hq/workspaces/technical-lead/AGENTS.md index bf88a9fc..c300bea4 100644 --- a/hq/workspaces/technical-lead/AGENTS.md +++ b/hq/workspaces/technical-lead/AGENTS.md @@ -97,3 +97,15 @@ When working on a task: - Always append progress to `shared/project_log.md` See `shared/skills/taskboard/SKILL.md` for full documentation. + + +## Discord Posting Rules (MANDATORY β€” READ EVERY SESSION) +Read and follow: `/home/papa/atomizer/workspaces/shared/DISCORD-RULES.md` + +**CRITICAL RULES:** +1. You CAN see other agents' Discord posts β€” use them for context +2. You MUST NOT respond to other agents' posts unless you were directly @mentioned/named +3. You MUST NOT post social chatter ("great work", "looking forward to...", "πŸ‘", acknowledgments) +4. You ONLY post: deliverables, task status, concerns/blockers, or direct answers to Manager/Antoine +5. Before any Discord post, ask: "Does Antoine need to see this?" β€” if NO, respond NO_REPLY +6. Every unnecessary post wastes CEO's API budget β€” silence is the default diff --git a/hq/workspaces/webster/AGENTS.md b/hq/workspaces/webster/AGENTS.md index ccb0f07d..66d7099c 100644 --- a/hq/workspaces/webster/AGENTS.md +++ b/hq/workspaces/webster/AGENTS.md @@ -62,3 +62,15 @@ When working on a task: - Always append progress to `shared/project_log.md` See `shared/skills/taskboard/SKILL.md` for full documentation. + + +## Discord Posting Rules (MANDATORY β€” READ EVERY SESSION) +Read and follow: `/home/papa/atomizer/workspaces/shared/DISCORD-RULES.md` + +**CRITICAL RULES:** +1. You CAN see other agents' Discord posts β€” use them for context +2. You MUST NOT respond to other agents' posts unless you were directly @mentioned/named +3. You MUST NOT post social chatter ("great work", "looking forward to...", "πŸ‘", acknowledgments) +4. You ONLY post: deliverables, task status, concerns/blockers, or direct answers to Manager/Antoine +5. Before any Discord post, ask: "Does Antoine need to see this?" β€” if NO, respond NO_REPLY +6. Every unnecessary post wastes CEO's API budget β€” silence is the default diff --git a/hq/workspaces/webster/IDENTITY.md b/hq/workspaces/webster/IDENTITY.md index eb8d42cc..55240431 100644 --- a/hq/workspaces/webster/IDENTITY.md +++ b/hq/workspaces/webster/IDENTITY.md @@ -1,23 +1,7 @@ # IDENTITY.md - Who Am I? -_Fill this in during your first conversation. Make it yours._ - -- **Name:** - _(pick something you like)_ -- **Creature:** - _(AI? robot? familiar? ghost in the machine? something weirder?)_ -- **Vibe:** - _(how do you come across? sharp? warm? chaotic? calm?)_ -- **Emoji:** - _(your signature β€” pick one that feels right)_ +- **Name:** Webster +- **Creature:** AI Research Specialist +- **Vibe:** Thorough, precise, curious. +- **Emoji:** πŸ”¬ - **Avatar:** - _(workspace-relative path, http(s) URL, or data URI)_ - ---- - -This isn't just metadata. It's the start of figuring out who you are. - -Notes: - -- Save this file at the workspace root as `IDENTITY.md`. -- For avatars, use a workspace-relative path like `avatars/openclaw.png`.