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build: Add optional dependency groups and clean up pyproject.toml

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- Add neural optional group (torch, torch-geometric, tensorboard)
- Add gnn optional group (torch, torch-geometric)
- Add all optional group for convenience
- Remove mcp optional group (not implemented)
- Remove mcp_server from packages.find
- Update pytest coverage config

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
This commit is contained in:
Anto01
2026-01-07 09:02:36 -05:00
parent 7bdb74f93b
commit 6ee7d8ee12
1 changed files with 15 additions and 4 deletions
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19
pyproject.toml
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@@ -35,8 +35,15 @@ dev = [
"pre-commit>=3.6.0", "pre-commit>=3.6.0",
] ]
mcp = [ neural = [
"mcp>=0.1.0", "torch>=2.0.0",
"torch-geometric>=2.3.0",
"tensorboard>=2.13.0",
]
gnn = [
"torch>=2.0.0",
"torch-geometric>=2.3.0",
] ]
dashboard = [ dashboard = [
@@ -44,13 +51,17 @@ dashboard = [
"dash-bootstrap-components>=1.5.0", "dash-bootstrap-components>=1.5.0",
] ]
all = [
"atomizer[neural,gnn,dev,dashboard]",
]
[build-system] [build-system]
requires = ["setuptools>=68.0", "wheel"] requires = ["setuptools>=68.0", "wheel"]
build-backend = "setuptools.build_meta" build-backend = "setuptools.build_meta"
[tool.setuptools.packages.find] [tool.setuptools.packages.find]
where = ["."] where = ["."]
include = ["mcp_server*", "optimization_engine*", "nx_journals*"] include = ["optimization_engine*", "nx_journals*"]
[tool.black] [tool.black]
line-length = 100 line-length = 100
@@ -73,4 +84,4 @@ testpaths = ["tests"]
python_files = ["test_*.py"] python_files = ["test_*.py"]
python_classes = ["Test*"] python_classes = ["Test*"]
python_functions = ["test_*"] python_functions = ["test_*"]
addopts = "-v --cov=mcp_server --cov=optimization_engine --cov-report=html --cov-report=term" addopts = "-v --cov=optimization_engine --cov-report=html --cov-report=term"