feat: Add Protocol 13 adaptive optimization, Plotly charts, and dashboard improvements

## Protocol 13: Adaptive Multi-Objective Optimization
- Iterative FEA + Neural Network surrogate workflow
- Initial FEA sampling, NN training, NN-accelerated search
- FEA validation of top NN predictions, retraining loop
- adaptive_state.json tracks iteration history and best values
- M1 mirror study (V11) with 103 FEA, 3000 NN trials

## Dashboard Visualization Enhancements
- Added Plotly.js interactive charts (parallel coords, Pareto, convergence)
- Lazy loading with React.lazy() for performance
- Code splitting: plotly.js-basic-dist (~1MB vs 3.5MB)
- Chart library toggle (Recharts default, Plotly on-demand)
- ExpandableChart component for full-screen modal views
- ConsoleOutput component for real-time log viewing

## Documentation
- Protocol 13 detailed documentation
- Dashboard visualization guide
- Plotly components README
- Updated run-optimization skill with Mode 5 (adaptive)

## Bug Fixes
- Fixed TypeScript errors in dashboard components
- Fixed Card component to accept ReactNode title
- Removed unused imports across components

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>

atomizer-dashboard/frontend/package-lock.json

@@ -11,12 +11,15 @@
         "@react-three/drei": "^10.7.7",
         "@react-three/fiber": "^9.4.0",
         "@tanstack/react-query": "^5.90.10",
+        "@types/react-plotly.js": "^2.6.3",
         "@types/three": "^0.181.0",
         "clsx": "^2.1.1",
         "lucide-react": "^0.554.0",
+        "plotly.js-basic-dist": "^3.3.0",
         "react": "^18.2.0",
         "react-dom": "^18.2.0",
         "react-markdown": "^10.1.0",
+        "react-plotly.js": "^2.6.0",
         "react-router-dom": "^6.20.0",
         "react-use-websocket": "^4.13.0",
         "recharts": "^2.10.3",
@@ -1651,18 +1654,22 @@
       "integrity": "sha512-ieXiYmgSRXUDeOntE1InxjWyvEelZGP63M+cGuquuRLuIKKT1osnkXjxev9B7d1nXSug5vpunx+gNlbVxMlC9A==",
       "license": "MIT"
     },
+    "node_modules/@types/plotly.js": {
+      "version": "3.0.8",
+      "resolved": "https://registry.npmjs.org/@types/plotly.js/-/plotly.js-3.0.8.tgz",
+      "integrity": "sha512-FjmSFaLmHVgBIBL6H0yX5k/AB3a7FQzjKBlRUF8YT6HiXMArE+hbXYIZXZ/42SBrdL05LWEog0zPqEaIDNsAiw==",
+      "license": "MIT"
+    },
     "node_modules/@types/prop-types": {
       "version": "15.7.15",
       "resolved": "https://registry.npmjs.org/@types/prop-types/-/prop-types-15.7.15.tgz",
       "integrity": "sha512-F6bEyamV9jKGAFBEmlQnesRPGOQqS2+Uwi0Em15xenOxHaf2hv6L8YCVn3rPdPJOiJfPiCnLIRyvwVaqMY3MIw==",
-      "dev": true,
       "license": "MIT"
     },
     "node_modules/@types/react": {
       "version": "18.3.27",
       "resolved": "https://registry.npmjs.org/@types/react/-/react-18.3.27.tgz",
       "integrity": "sha512-cisd7gxkzjBKU2GgdYrTdtQx1SORymWyaAFhaxQPK9bYO9ot3Y5OikQRvY0VYQtvwjeQnizCINJAenh/V7MK2w==",
-      "dev": true,
       "license": "MIT",
       "dependencies": {
         "@types/prop-types": "*",
@@ -1679,6 +1686,16 @@
         "@types/react": "^18.0.0"
       }
     },
+    "node_modules/@types/react-plotly.js": {
+      "version": "2.6.3",
+      "resolved": "https://registry.npmjs.org/@types/react-plotly.js/-/react-plotly.js-2.6.3.tgz",
+      "integrity": "sha512-HBQwyGuu/dGXDsWhnQrhH+xcJSsHvjkwfSRjP+YpOsCCWryIuXF78ZCBjpfgO3sCc0Jo8sYp4NOGtqT7Cn3epQ==",
+      "license": "MIT",
+      "dependencies": {
+        "@types/plotly.js": "*",
+        "@types/react": "*"
+      }
+    },
     "node_modules/@types/react-reconciler": {
       "version": "0.32.3",
       "resolved": "https://registry.npmjs.org/@types/react-reconciler/-/react-reconciler-0.32.3.tgz",
@@ -5340,6 +5357,12 @@
         "node": ">= 6"
       }
     },
+    "node_modules/plotly.js-basic-dist": {
+      "version": "3.3.0",
+      "resolved": "https://registry.npmjs.org/plotly.js-basic-dist/-/plotly.js-basic-dist-3.3.0.tgz",
+      "integrity": "sha512-0dm5OLno2b5nuHI/V+/deVy6z2dELOOvBKyD7d6p7S/tcqmn0Bt6LMf007PbtC+VCwNPybjKFA5cbZ6B0JiTMQ==",
+      "license": "MIT"
+    },
     "node_modules/postcss": {
       "version": "8.5.6",
       "resolved": "https://registry.npmjs.org/postcss/-/postcss-8.5.6.tgz",
@@ -5645,6 +5668,19 @@
         "react": ">=18"
       }
     },
+    "node_modules/react-plotly.js": {
+      "version": "2.6.0",
+      "resolved": "https://registry.npmjs.org/react-plotly.js/-/react-plotly.js-2.6.0.tgz",
+      "integrity": "sha512-g93xcyhAVCSt9kV1svqG1clAEdL6k3U+jjuSzfTV7owaSU9Go6Ph8bl25J+jKfKvIGAEYpe4qj++WHJuc9IaeA==",
+      "license": "MIT",
+      "dependencies": {
+        "prop-types": "^15.8.1"
+      },
+      "peerDependencies": {
+        "plotly.js": ">1.34.0",
+        "react": ">0.13.0"
+      }
+    },
     "node_modules/react-reconciler": {
       "version": "0.31.0",
       "resolved": "https://registry.npmjs.org/react-reconciler/-/react-reconciler-0.31.0.tgz",