feat: Add Protocol 13 adaptive optimization, Plotly charts, and dashboard improvements

## Protocol 13: Adaptive Multi-Objective Optimization
- Iterative FEA + Neural Network surrogate workflow
- Initial FEA sampling, NN training, NN-accelerated search
- FEA validation of top NN predictions, retraining loop
- adaptive_state.json tracks iteration history and best values
- M1 mirror study (V11) with 103 FEA, 3000 NN trials

## Dashboard Visualization Enhancements
- Added Plotly.js interactive charts (parallel coords, Pareto, convergence)
- Lazy loading with React.lazy() for performance
- Code splitting: plotly.js-basic-dist (~1MB vs 3.5MB)
- Chart library toggle (Recharts default, Plotly on-demand)
- ExpandableChart component for full-screen modal views
- ConsoleOutput component for real-time log viewing

## Documentation
- Protocol 13 detailed documentation
- Dashboard visualization guide
- Plotly components README
- Updated run-optimization skill with Mode 5 (adaptive)

## Bug Fixes
- Fixed TypeScript errors in dashboard components
- Fixed Card component to accept ReactNode title
- Removed unused imports across components

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>

atomizer-dashboard/frontend/vite.config.ts

@@ -16,5 +16,29 @@ export default defineConfig({
         ws: true,
       }
     }
+  },
+  resolve: {
+    alias: {
+      // Use the smaller basic Plotly distribution
+      'plotly.js/dist/plotly': 'plotly.js-basic-dist'
+    }
+  },
+  build: {
+    rollupOptions: {
+      output: {
+        manualChunks: {
+          // Separate Plotly into its own chunk for better caching
+          plotly: ['plotly.js-basic-dist', 'react-plotly.js'],
+          // Separate React and core libs
+          vendor: ['react', 'react-dom', 'react-router-dom'],
+          // Recharts in its own chunk
+          recharts: ['recharts']
+        }
+      }
+    },
+    chunkSizeWarningLimit: 600
+  },
+  optimizeDeps: {
+    include: ['plotly.js-basic-dist']
   }
 })