feat: Major update - Physics docs, Zernike OPD, insights, NX journals, tools
Documentation: - Add docs/06_PHYSICS/ with Zernike fundamentals and OPD method docs - Add docs/guides/CMA-ES_EXPLAINED.md optimization guide - Update CLAUDE.md and ATOMIZER_CONTEXT.md with current architecture - Update OP_01_CREATE_STUDY protocol Planning: - Add DYNAMIC_RESPONSE plans for random vibration/PSD support - Add OPTIMIZATION_ENGINE_MIGRATION_PLAN for code reorganization Insights System: - Update design_space, modal_analysis, stress_field, thermal_field insights - Improve error handling and data validation NX Journals: - Add analyze_wfe_zernike.py for Zernike WFE analysis - Add capture_study_images.py for automated screenshots - Add extract_expressions.py and introspect_part.py utilities - Add user_generated_journals/journal_top_view_image_taking.py Tests & Tools: - Add comprehensive Zernike OPD test suite - Add audit_v10 tests for WFE validation - Add tools for Pareto graphs and mirror data extraction - Add migrate_studies_to_topics.py utility Knowledge Base: - Initialize LAC (Learning Atomizer Core) with failure/success patterns Dashboard: - Update Setup.tsx and launch_dashboard.py - Add restart-dev.bat helper script 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
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@@ -136,9 +136,11 @@ studies/{geometry_type}/{study_name}/
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| E3 | Von Mises Stress | `extract_solid_stress()` | **Specify element_type!** |
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| E4 | BDF Mass | `extract_mass_from_bdf()` | kg |
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| E5 | CAD Mass | `extract_mass_from_expression()` | kg |
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| E8-10 | Zernike WFE | `extract_zernike_*()` | nm (mirrors) |
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| E8-10 | Zernike WFE (standard) | `extract_zernike_*()` | nm (mirrors) |
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| E12-14 | Phase 2 | Principal stress, strain energy, SPC forces |
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| E15-18 | Phase 3 | Temperature, heat flux, modal mass |
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| E20 | Zernike Analytic | `extract_zernike_analytic()` | nm (parabola-based) |
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| E22 | **Zernike OPD** | `extract_zernike_opd()` | nm (**RECOMMENDED**) |
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**Critical**: For stress extraction, specify element type:
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- Shell (CQUAD4): `element_type='cquad4'`
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