Major changes:
- Dashboard: WebSocket-based chat with session management
- Dashboard: New chat components (ChatPane, ChatInput, ModeToggle)
- Dashboard: Enhanced UI with parallel coordinates chart
- MCP Server: New atomizer-tools server for Claude integration
- Extractors: Enhanced Zernike OPD extractor
- Reports: Improved report generator
New studies (configs and scripts only):
- M1 Mirror: Cost reduction campaign studies
- Simple Beam, Simple Bracket, UAV Arm studies
Note: Large iteration data (2_iterations/, best_design_archive/)
excluded via .gitignore - kept on local Gitea only.
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Dashboard integration for Study Insights module (SYS_16):
- Backend: New /api/insights/ routes for generating and viewing insights
- Frontend: New Insights.tsx page with Plotly visualization
- Navigation: Added Insights tab between Analysis and Results
Available insight types:
- Zernike WFE (wavefront error for mirrors)
- Stress Field (Von Mises stress contours)
- Modal Analysis (natural frequencies/mode shapes)
- Thermal Field (temperature distribution)
- Design Space (parameter-objective exploration)
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Dashboard enhancements:
- Add Analysis page with tabs: Overview, Parameters, Pareto, Correlations, Constraints, Surrogate, Runs
- Add PlotlyCorrelationHeatmap for parameter-objective correlation analysis
- Add PlotlyFeasibilityChart for constraint satisfaction visualization
- Add PlotlySurrogateQuality for FEA vs NN prediction comparison
- Add PlotlyRunComparison for comparing optimization runs within a study
Real-time improvements:
- Replace watchdog file-watching with SQLite database polling for better Windows reliability
- Add DatabasePoller class with 2-second polling interval
- Enhanced WebSocket messages: trial_completed, new_best, pareto_update, progress
Desktop notifications:
- Add useNotifications hook using Web Notifications API
- Add NotificationSettings toggle component
- Notify users when new best solutions are found
Config editor:
- Add PUT /studies/{study_id}/config endpoint with auto-backup
- Add ConfigEditor modal with tabs: General, Variables, Objectives, Settings, JSON
- Prevents editing while optimization is running
Enhanced Pareto visualization:
- Add dark mode styling with transparent backgrounds
- Add stats bar showing Pareto, FEA, NN, and infeasible counts
- Add Pareto front connecting line for 2D view
- Add table showing top 10 Pareto-optimal solutions
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude <noreply@anthropic.com>
Phase 1 - Accurate study status detection:
- Add is_optimization_running() to check for active processes
- Add get_accurate_study_status() with proper status logic
- Status now: not_started, running, paused, completed
- Add "paused" status styling (orange) to Home page
Phase 2 - Global Claude terminal:
- Create ClaudeTerminalContext for app-level state
- Create GlobalClaudeTerminal floating component
- Terminal persists across page navigation
- Shows green indicator when connected
- Remove inline terminal from Dashboard
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude <noreply@anthropic.com>
- Add embedded Claude Code terminal with xterm.js for full CLI experience
- Create WebSocket PTY backend for real-time terminal communication
- Add terminal status endpoint to check CLI availability
- Update dashboard to use Claude Code terminal instead of API chat
- Add optimization control panel with start/stop/validate actions
- Add study context provider for global state management
- Update frontend with new dependencies (xterm.js addons)
- Comprehensive README documentation for all new features
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude <noreply@anthropic.com>
