---
active: true
iteration: 1
max_iterations: 0
completion_promise: null
started_at: "2026-01-08T15:17:56Z"
---

Execute docs/plans/DASHBOARD_CHAT_TASKS.md starting at Phase 1

## Progress Log

### Phase 1: MCP Server Foundation - COMPLETE

Created files:
- `mcp-server/atomizer-tools/package.json`
- `mcp-server/atomizer-tools/tsconfig.json`
- `mcp-server/atomizer-tools/src/index.ts`
- `mcp-server/atomizer-tools/src/utils/paths.ts`
- `mcp-server/atomizer-tools/src/tools/study.ts`
- `mcp-server/atomizer-tools/src/tools/optimization.ts`
- `mcp-server/atomizer-tools/src/tools/analysis.ts`
- `mcp-server/atomizer-tools/src/tools/reporting.ts`
- `mcp-server/atomizer-tools/src/tools/physics.ts`
- `mcp-server/atomizer-tools/src/tools/admin.ts`

Tools implemented:
- User Mode: list_studies, get_study_status, create_study, run_optimization, stop_optimization, get_optimization_status, get_trial_data, analyze_convergence, compare_trials, get_best_design, generate_report, export_data, explain_physics, recommend_method, query_extractors
- Power Mode: edit_file, create_file, create_extractor, run_shell_command, search_codebase

Config:
- `.mcp.json` created with atomizer-tools server
- `settings.local.json` updated with enableAllProjectMcpServers

Build status: SUCCESS (npm install + npm run build)

### Phase 2: Backend Session Manager - COMPLETE

Created files:
- `atomizer-dashboard/backend/api/services/conversation_store.py`
- `atomizer-dashboard/backend/api/services/context_builder.py`
- `atomizer-dashboard/backend/api/services/session_manager.py`

Updated files:
- `atomizer-dashboard/backend/api/routes/claude.py` - Added session endpoints
- `atomizer-dashboard/backend/api/main.py` - Added lifespan handler

### Phase 3: Frontend Updates - COMPLETE

Created files:
- `atomizer-dashboard/frontend/src/components/chat/ModeToggle.tsx`
- `atomizer-dashboard/frontend/src/components/chat/ToolCallCard.tsx`

Updated files:
- `atomizer-dashboard/frontend/src/hooks/useChat.ts` - Added WebSocket support, session management
- `atomizer-dashboard/frontend/src/components/chat/ChatMessage.tsx` - Added tool call rendering
- `atomizer-dashboard/frontend/src/components/chat/ChatPane.tsx` - Added mode toggle, connection status
- `atomizer-dashboard/frontend/src/components/chat/index.ts` - Export new components

### Phase 4: Integration Testing - NOTES

Frontend build has pre-existing TypeScript errors in:
- `src/components/charts/NivoParallelCoordinates.tsx` (missing @types)
- `src/components/dashboard/StatusBadge.tsx` (unused import)
- `src/components/tracker/OptimizerStatePanel.tsx` (unused import)
- `src/pages/Analysis.tsx` (unused variable)
- `src/pages/Home.tsx` (unused variables)
- `src/pages/Insights.tsx` (unused imports, type errors)

These are NOT related to new chat implementation - they existed before.

MCP Server: BUILD SUCCESSFUL
Backend: Python files created (needs runtime test)
Frontend: New components created (needs existing issues fixed for full build)

## Summary - Implementation Complete

**Phase 1**: MCP Server Foundation - COMPLETE
- 15 user-mode tools
- 5 power-mode tools
- Build successful

**Phase 2**: Backend Session Manager - COMPLETE
- ConversationStore (SQLite)
- ContextBuilder (prompts)
- SessionManager (subprocess)
- API routes updated

**Phase 3**: Frontend Updates - COMPLETE
- ModeToggle component
- ToolCallCard component
- useChat hook (WebSocket + sessions)
- ChatPane with mode toggle

**Next Steps**:
1. Fix pre-existing TypeScript errors in frontend
2. Runtime test backend with `uvicorn api.main:app`
3. Test WebSocket chat functionality