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Atomizer Project Standard — Executive Audit Summary

For: Antoine Letarte, CEO
From: Auditor 🔍
Date: 2026-02-19
TL;DR: Spec is over-engineered. Use Hydrotech Beam's structure — it already works.


VERDICT

The spec proposes enterprise-grade standardization for a one-person engineering practice.

  • 13 top-level files (PROJECT.md + AGENT.md + STATUS.md + CHANGELOG.md + ...)
  • 5-branch KB architecture (Design/Analysis/Manufacturing/Domain/Introspection)
  • 9-step template instantiation protocol
  • IBIS-inspired decision format (academic design rationale capture)

Recommendation: Adopt the Minimum Viable Standard (MVS) — codify what Hydrotech Beam already does, skip the academic bloat.


WHAT TO KEEP

From the spec, these parts are solid:

Feature Why Status
Self-contained project folders 100% context in one place Keep
Numbered studies (01_, 02_) Track campaign evolution Already in Hydrotech
Knowledge base Memory across studies Keep (simplified)
DECISIONS.md Why we chose X over Y Already in Hydrotech
Models baseline Golden copies, never edit Keep
Results tracking Reproducibility Keep

WHAT TO CUT

These add complexity without value for a solo consultant:

Feature Why Cut Impact
AGENT.md (separate file) LLM ops can live in README Merge into README
STATUS.md (separate file) Goes stale immediately Merge into README
CHANGELOG.md Git log + DECISIONS.md already track this Remove
Numbered folders (00-, 01-, 02-) Cognitive overhead, no clear benefit Use simple names
5-branch KB Enterprise-scale, not solo-scale Use 4-folder KB (Hydrotech pattern)
00-context/ folder (4 files) Overkill — use single CONTEXT.md Single file
stakeholders.md You know who the client is Remove
.atomizer/ metadata Tooling doesn't exist yet Add when needed
IBIS decision format Too formal (Context/Options/Consequences) Use Hydrotech's simpler format

MINIMUM VIABLE STANDARD (MVS)

What Hydrotech Beam already has (with minor tweaks):

project-name/
│
├── README.md                 # Overview, status, navigation (ONE file, not 3)
├── CONTEXT.md                # Client, requirements, scope (ONE file, not 4)
├── DECISIONS.md              # Simple format: Date, By, Decision, Rationale, Status
│
├── models/                   # Golden copies (not 01-models/)
│   ├── README.md
│   └── baseline/
│
├── kb/                       # Knowledge base (not 02-kb/)
│   ├── _index.md
│   ├── components/           # 4 folders, not 5 branches
│   ├── materials/
│   ├── fea/
│   └── dev/
│
├── studies/                  # Numbered campaigns (not 03-studies/)
│   ├── 01_doe_landscape/
│   └── 02_tpe_refinement/
│
├── reports/                  # Client deliverables (not 04-reports/)
├── images/                   # Screenshots, plots
└── tools/                    # Custom scripts (optional, not 05-tools/)

Total: 3 files + 6 folders = 9 items (vs. spec's 13-15)


COMPARISON: SPEC vs. MVS vs. HYDROTECH

Feature Spec MVS Hydrotech Today
Entry point PROJECT.md + AGENT.md + STATUS.md README.md README.md
Context docs 00-context/ (4 files) CONTEXT.md CONTEXT.md
Decisions IBIS format (5 sections) Simple format (4 fields) Simple format
Top folders Numbered (00-, 01-, 02-) Simple names Simple names
KB structure 5 branches 4 folders 4 folders
Studies 03-studies/ (numbered) studies/ (numbered) studies/ (numbered)
Changelog CHANGELOG.md (skip) (none)
Agent ops AGENT.md (in README) USER_GUIDE.md ≈
Metadata .atomizer/ (skip) (none)

Conclusion: Hydrotech Beam is already 90% compliant with MVS. Just formalize it.


ALIGNMENT WITH REAL PROJECTS

M1 Mirror

  • Current: Flat, unnumbered studies. Knowledge scattered. No decision log.
  • Spec alignment: Poor (doesn't follow ANY of the spec)
  • Recommendation: Leave as-is (completed project). Use MVS for NEW projects only.

Hydrotech Beam

  • Current: README, CONTEXT, DECISIONS, kb/, models/, numbered studies, playbooks/
  • Spec alignment: ⚠️ Partial (simpler versions of most elements)
  • Recommendation: Hydrotech IS the standard — codify what it does.

KEY QUESTIONS ANSWERED

Q: Is the 7-stage study lifecycle practical?

A: No. Too rigid. Use 3 phases: Setup → Execute → Review.

Q: Are numbered folders better than simple names?

A: No. Cognitive overhead. Keep numbering ONLY for studies (01_, 02_).

Q: Is the 5-branch KB too complex?

A: Yes. Use 4 folders: components/, materials/, fea/, dev/ (Hydrotech pattern).

Q: Is DECISIONS.md realistic to maintain?

A: Yes, IF format is simple (Date, By, Decision, Rationale, Status). Hydrotech proves this works.

Q: What's the minimum viable version?

A: See MVS above — 9 items total (3 files + 6 folders).


WHAT'S MISSING

The spec missed some practical needs:

Missing Feature Why Needed Suggestion
Client comms log Track emails, meetings, changes Add COMMUNICATIONS.md
Time tracking Billable hours Add HOURS.md or integrate tool
Quick wins checklist Getting started Add CHECKLIST.md
Design alternatives matrix Early-stage exploration Add ALTERNATIVES.md
BREAKDOWN.md Technical analysis Hydrotech has this — spec missed it!

ACTIONABLE RECOMMENDATIONS

Do This Now

  1. Adopt MVS — Use Hydrotech's structure as the template
  2. Single README.md — Merge PROJECT + AGENT + STATUS into one file
  3. Drop folder numbering — Use models/, kb/, studies/ (not 00-, 01-, 02-)
  4. Keep simple KB — 4 folders (components/, materials/, fea/, dev/), not 5 branches
  5. Keep simple DECISIONS.md — Hydrotech format works

Add Later (If Needed)

  • COMMUNICATIONS.md (client interaction log)
  • HOURS.md (time tracking)
  • playbooks/ (only for complex projects)
  • .atomizer/ metadata (when CLI tooling exists)

Skip Entirely

  • AGENT.md (use README)
  • STATUS.md (use README)
  • CHANGELOG.md (use Git log)
  • Numbered top-level folders
  • 5-branch KB architecture
  • IBIS decision format
  • 9-step instantiation protocol

BOTTOM LINE

The spec is well-researched but over-engineered.

You need a pragmatic standard for a solo consultant, not enterprise design rationale capture.

Recommendation: Formalize Hydrotech Beam's structure — it's already 90% there and PROVEN to work.

Next step: Approve MVS → I'll create a lightweight project template based on Hydrotech.


Full audit: /home/papa/atomizer/workspaces/auditor/memory/2026-02-19-spec-audit.md