Atomizer

Files

Anto01 b8a04c62b8 docs: Consolidate documentation and fix protocol numbering (partial)

Phase 2 of restructuring plan:
- Rename SYS_16_STUDY_INSIGHTS -> SYS_17_STUDY_INSIGHTS
- Rename SYS_17_CONTEXT_ENGINEERING -> SYS_18_CONTEXT_ENGINEERING
- Promote Bootstrap V3.0 (Context Engineering) as default
- Archive old Bootstrap V2.0
- Create knowledge_base/playbook.json for ACE framework
- Add OP_08 (Generate Report) to routing tables
- Add SYS_16-18 to protocol tables
- Update docs/protocols/README.md to version 1.1
- Update CLAUDE.md with new protocols
- Create docs/plans/RESTRUCTURING_PLAN.md for continuation

Remaining: Phase 2.8 (Cheatsheet), Phases 3-6

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

2026-01-07 08:52:07 -05:00

OP_01_CREATE_STUDY.md

feat: Implement Study Interview Mode as default study creation method

2026-01-03 11:06:07 -05:00

OP_02_RUN_OPTIMIZATION.md

feat: Add post-optimization tools and mandatory best design archiving

2025-12-12 10:28:35 -05:00

OP_03_MONITOR_PROGRESS.md

feat: Add MLP surrogate with Turbo Mode for 100x faster optimization

2025-12-06 20:01:59 -05:00

OP_04_ANALYZE_RESULTS.md

feat: Add MLP surrogate with Turbo Mode for 100x faster optimization