d1261d62fd
## Removed Duplicate Directories - Deleted old `dashboard/` (replaced by atomizer-dashboard) - Deleted old `mcp_server/` Python tools (moved model_discovery to optimization_engine) - Deleted `tests/mcp_server/` (obsolete tests) - Deleted `launch_dashboard.bat` (old launcher) ## Consolidated Code - Moved `mcp_server/tools/model_discovery.py` to `optimization_engine/model_discovery/` - Updated import in `optimization_config_builder.py` - Deleted stub `extract_mass.py` (use extract_mass_from_bdf instead) - Deleted unused `intelligent_setup.py` and `hybrid_study_creator.py` - Archived `result_extractors/` to `archive/deprecated/` ## Documentation Cleanup - Deleted deprecated `docs/06_PROTOCOLS_DETAILED/` (14 files) - Archived dated dev docs to `docs/08_ARCHIVE/sessions/` - Archived old plans to `docs/08_ARCHIVE/plans/` - Updated `docs/protocols/README.md` with SYS_15 ## Skills Consolidation - Archived redundant study creation skills to `.claude/skills/archive/` - Kept `core/study-creation-core.md` as canonical ## Housekeeping - Updated `.gitignore` to prevent `nul` and `_dat_run*.dat` 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
98 lines
982 B
Plaintext
98 lines
982 B
Plaintext
# Python
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__pycache__/
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*.py[cod]
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*$py.class
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*.so
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.Python
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build/
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develop-eggs/
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dist/
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downloads/
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eggs/
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.eggs/
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lib/
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lib64/
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parts/
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sdist/
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var/
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wheels/
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*.egg-info/
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.installed.cfg
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*.egg
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MANIFEST
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.pytest_cache/
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.coverage
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htmlcov/
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*.cover
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.hypothesis/
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# Virtual Environment
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venv/
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ENV/
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env/
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.venv
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# IDEs
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.vscode/
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.idea/
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*.swp
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*.swo
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*~
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.DS_Store
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# NX/FEA Files
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*.op2
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*.f06
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*.f04
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*.xdb
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*.log
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*.diag
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*.pch
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*.master
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*.dball
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*.ldra
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*.sdb
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*.sim.bak
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*.prt.bak
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*.dat
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*.html
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*.png
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# Optimization Results (generated during runs - do not commit)
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optuna_study.db
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optuna_study.db-journal
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history.csv
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history.json
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history.bak
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next.exp
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RMS_log.csv
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archives/
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temp/
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*.tmp
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optimization_results/
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**/optimization_results/
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study_*.db
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study_*_metadata.json
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# Test outputs (generated during testing)
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tests/optimization_results/
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# Node modules (for dashboard)
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node_modules/
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.npm
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.cache
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dist/
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build/
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# Environment variables
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.env
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.env.local
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# OS
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Thumbs.db
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desktop.ini
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nul
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# Temporary data files
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_dat_run*.dat
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