Anto01 f76bd52894 feat: Implement Protocol 13 - Real-Time Dashboard Tracking ...

Complete implementation of Protocol 13 featuring real-time web dashboard
for monitoring multi-objective optimization studies.

## New Features

### Backend (Python)
- Real-time tracking system with per-trial JSON writes
- New API endpoints for metadata, optimizer state, and Pareto fronts
- Unit inference from objective descriptions
- Multi-objective support using Optuna's best_trials API

### Frontend (React + TypeScript)
- OptimizerPanel: Real-time optimizer state (phase, strategy, progress)
- ParetoPlot: Pareto front visualization with normalization toggle
  - 3 modes: Raw, Min-Max [0-1], Z-Score standardization
  - Pareto front line connecting optimal points
- ParallelCoordinatesPlot: High-dimensional interactive visualization
  - Objectives + design variables on parallel axes
  - Click-to-select, hover-to-highlight
  - Color-coded feasibility
- Dynamic units throughout all visualizations

### Documentation
- Comprehensive Protocol 13 guide with architecture, data flow, usage

## Files Added
- `docs/PROTOCOL_13_DASHBOARD.md`
- `atomizer-dashboard/frontend/src/components/OptimizerPanel.tsx`
- `atomizer-dashboard/frontend/src/components/ParetoPlot.tsx`
- `atomizer-dashboard/frontend/src/components/ParallelCoordinatesPlot.tsx`
- `optimization_engine/realtime_tracking.py`

## Files Modified
- `atomizer-dashboard/frontend/src/pages/Dashboard.tsx`
- `atomizer-dashboard/backend/api/routes/optimization.py`
- `optimization_engine/intelligent_optimizer.py`

## Testing
- Tested with bracket_stiffness_optimization_V2 (30 trials, 20 Pareto solutions)
- Dashboard running on localhost:3001
- All P1 and P2 features verified working

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>

2025-11-21 15:58:00 -05:00

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